KEGG   Mesorhizobium erdmanii: EB233_29395
Entry
EB233_29395       CDS       T06791                                 
Name
(GenBank) type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
merd  Mesorhizobium erdmanii
Pathway
merd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:merd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EB233_29395
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:merd02044]
    EB233_29395
Enzymes [BR:merd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     EB233_29395
Secretion system [BR:merd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   EB233_29395
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DUF1657
Other DBs
NCBI-ProteinID: QKC79101
UniProt: A0A6M7UPC0
LinkDB
Position
complement(6024778..6026469)
AA seq 563 aa
MSSTKTTPPNIALSIACSLALGFCAASLYATFRHGGSGEALMTFDVRAFWFETPFYLGFA
TPVFYRGVAIVLATSAVVLLIQQVVLRRKLEHHGTARWARVDEMRCTGYLRRYRSVTGPV
FGKTSGPFWPGYYLTNGEQPHSLIVAPTRAGKGIGIVIPTLLTFKGSVIALDVKGELFEL
TSRARKATGDNVFKFAPLDSERRTNCYNPLLDLIALPPQLQFTEARRLAANLITAKGEGA
EGFVSGARDIFVAGILACIERGTPTIGAVYDLFAQPGEKFKLFAQLAMETRNKEAQRIFD
DMAGNDTKILTSYTSVLGDGGLNLWADPAVKAATSRSDFSVYDLRRRRTCIYLCVGPNDL
EVIAPLIRLFFQQIVSILQRSLPRQDEKNEVLFLLDEFKHLGKLEAIETAITTIAGYKGR
FMLIIQSLSALTGAYGEAGKQNFLSNTGLQVFMATADDETPTYISKAIGEYTFEAKSISY
SQARTFDWNIQNSHQGAPLLRPEQVRLLDEDYEIVLIKGLPPLQLRKVRYYSDRILKRIF
ESQTGALPEPAPLMEAHPDDTDG
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgtcttcaacaaaaacgacgcccccaaacatagctcttagcatcgcgtgctcgctcgcc
ttgggcttctgcgcggcaagtctgtacgcaacgttccgccacgggggtagcggcgaggct
ttgatgacgtttgacgtccgtgccttttggtttgagacgccgttctatctgggtttcgca
acccctgtcttctatcggggcgtagctatcgtgctcgcaacgtcggcggtcgtcttgctg
attcagcaggtcgtattgcggcgcaaactcgaacaccacgggacggcgcgttgggctcga
gtcgacgaaatgcgatgcaccggatatctgcgacgatatcgtagcgtgacagggccggta
tttgggaagacaagtggccctttctggcctggctactacctgaccaatggcgagcagcct
cacagcctcatcgttgcaccgacccgcgccggcaagggcatcggcatagtcattccaacg
ctacttacattcaaaggctcagtgatagctctcgacgtcaagggggagctctttgagctc
acctctagggcgcgcaaagccacaggcgacaacgtgttcaaattcgcgccgctggattcg
gagcggcgcaccaactgctacaatccgctgttggaccttatagcgctgcctccgcagctg
caattcaccgaagcccgccgcttggccgcaaacctgatcacggcaaagggggagggcgcg
gaaggtttcgtcagcggcgcgcgagatatctttgtcgcggggatccttgcctgcatcgag
cggggcacgccaacaatcggcgccgtctatgacctcttcgcccagccgggggagaagttc
aagctcttcgcgcaactcgccatggagacccggaacaaagaggcacaacgcatcttcgac
gacatggcggggaacgatacaaaaatcctgacctcctacacgtccgtcctcggcgatggc
gggctcaatctgtgggcggatccggctgtaaaggcagcgacaagtcgctcggacttttcg
gtctatgatcttcgccgtcgcagaacgtgcatctatctgtgcgtcggtccgaacgacctt
gaggtgatcgcgcctttgatacgcctgttctttcagcaaatcgtttcaattctacagcgg
tcgctgccccgccaagatgaaaagaacgaggttctctttctgctcgacgagttcaagcac
ttgggtaagctggaggcgatcgagaccgcaattacgaccatagcgggctacaagggtcgt
ttcatgctcatcatccaaagcctttcggcactgacgggggcctatggagaggctggcaag
cagaattttctgagcaataccggcctgcaagtgttcatggccactgccgatgacgagact
ccaacctacatttccaaagccatcggtgaatacacgtttgaagccaagtcgatttcctac
agccaggcgcgaacgttcgattggaacattcagaattcacatcaaggtgcaccgctgttg
cgtcccgaacaggttcggctgctcgatgaagactacgagattgttctcatcaaaggcctg
ccaccattgcaattgaggaaggtgcgatattattcggatcgcattctgaaacgcatcttc
gaaagccagacaggcgccctcccggagccggcacccttgatggaagctcatccagatgac
actgacggttaa

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