Methanogenium sp. S4BF: L1S32_04335
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Entry
L1S32_04335 CDS
T09590
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1S32_04335 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesb03400
]
L1S32_04335 (nth)
Enzymes [BR:
mesb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L1S32_04335 (nth)
DNA repair and recombination proteins [BR:
mesb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L1S32_04335 (nth)
Prokaryotic type
L1S32_04335 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
Peptidase_M76
Motif
Other DBs
NCBI-ProteinID:
WFN35354
LinkDB
All DBs
Position
891266..891916
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AA seq
216 aa
AA seq
DB search
MIQEEADLILCILTEDYPVHNGVISFLEFENPFQILILTILSAQTTDRIVNQVRGPLFRN
YPDAYALAHAAHEDVESIIRPTGFYHTKAKNIIATARALVAHYDGEVPQSMDELVTLPGV
GRKTANIVLNHAFGRNVGIAVDTHVQRLSQRIGFSDAAAPDAVEKDLMHLFDHSQWKYIN
YLLISHGRAVCTAKKPNCTACKISGHCRFFREKIST
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggaagaagcagacctgattctttgtatcctcaccgaagattatccagttcat
aatggcgtgatatcttttcttgaattcgaaaatccgttccagatccttattctcaccatc
ctgtccgcacagacaacggacagaatcgtaaatcaggtccgcggtccgcttttccggaac
tatcccgatgcatacgcactggcgcatgccgctcatgaagacgtggagtcaatcatccgt
ccgaccggattttaccacaccaaagcaaagaacatcatcgcaaccgcccgtgcccttgtc
gcacactacgacggagaggtaccccagagcatggacgagctggtcaccctgccgggagtc
ggcagaaagacggcgaacattgtcctgaaccatgcattcggacggaatgtaggaatcgcc
gttgatacccatgtgcaacggctttcccagagaatcggcttttctgatgcagcagcgccg
gatgcggttgaaaaagatctgatgcacctctttgaccactcccagtggaaatacatcaat
tatctcctcatatcacacgggcgggccgtctgcaccgcaaagaaacccaattgcacggca
tgtaaaatatccggtcactgccgctttttcagggaaaaaatcagtacctga
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