Manihot esculenta (cassava): 110611396
Help
Entry
110611396 CDS
T05761
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110611396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110611396
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110611396
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110611396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_11
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
110611396
NCBI-ProteinID:
XP_021607388
LinkDB
All DBs
Position
3:complement(7719288..7726503)
Genome browser
AA seq
362 aa
AA seq
DB search
MGFLRGFDRVTKYTFQSFRMFSKYVPTCRSSRYCCPLLEVIIVSLKTLYVMEEIKSFESQ
QMMSTFQHSGSRDDETKSTILHSQQLNEFLVKEQSDNMKILEMLDKGCMKYGCPHYRRRC
RIRAPCCNEVFDCRHCHNDAKNNINVNQKLRHDMPRHEVRQVICSLCGTEQEVRQFCINC
GVCMGRYFCETCKLFDDDTSKKQYHCDGCGICRIGGRENFFHCYKCGCCYSNFLKNSHPC
VEGAMHHDCPVCFEFLFESRYNVTVLPCGHTIHEKCLKEMREHCQYACPLCSKSVCDMSK
VWEKFDMEIAATPMPEPYQNKMVCSLVWILCNDCGKTTQVQYHVVAQKCLNCKSYNTRQT
RG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttgcgtggctttgatcgggtgactaaatatacctttcaaagttttagaatg
ttttctaaatatgttcctacatgcaggtcatctaggtattgttgccctctcttagaggtc
attattgtgagtttgaagacattgtatgtgatggaagaaatcaagagttttgagtctcaa
cagatgatgtcaacctttcaacattcaggtagcagagatgatgaaacgaagtcaacgatt
ttacactctcagcagttgaatgagttcttagttaaagaacaatcagacaatatgaagatt
ttggaaatgctagataaaggttgcatgaaatatggatgtcctcactatcgcagaaggtgc
cgcattagagcgccttgttgtaatgaggtctttgattgccgtcactgtcataatgatgca
aagaacaacatcaatgttaaccagaagcttagacatgatatgccacgccatgaagtgaga
caggtgatatgttcactttgtggcactgaacaagaggtccgacaattttgtatcaactgt
ggagtatgtatggggaggtatttctgtgagacttgtaagctgtttgatgatgatacatct
aagaaacagtatcattgtgatggctgtgggatttgtagaattggagggcgtgagaatttc
ttccattgttacaagtgtggctgctgctactcaaattttctgaagaacagccacccatgt
gtggagggggcgatgcaccatgattgccctgtttgttttgagtttttatttgagtcgaga
tataatgtaactgtattgccatgtggacacacaattcatgagaagtgcttgaaagagatg
agagaacactgccaatatgcttgccctctctgctccaagtcagtctgtgacatgtctaag
gtatgggagaaatttgatatggaaattgcagcaacgccaatgccagaaccttaccagaat
aaaatggtttgttctcttgtttggattctctgcaatgattgtggaaagacaacacaagtg
caatatcatgttgtagctcagaaatgcttgaattgcaagtcatataatacacgccaaacc
agaggctga
DBGET
integrated database retrieval system
