Manihot esculenta (cassava): 110623093
Help
Entry
110623093 CDS
T05761
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110623093
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
110623093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTP1_C1
MMS19_N
Motif
Other DBs
NCBI-GeneID:
110623093
NCBI-ProteinID:
XP_021623658
LinkDB
All DBs
Position
9:31385465..31392141
Genome browser
AA seq
940 aa
AA seq
DB search
MEQHVWNSCEQSLDTDKPLSPQALVSMRSLIINPHTSNSVISSILETLTRSLQLSADSLT
HHHTLKLLTELASYRTHLSPIIFRSLNSSSLLSTDSTLLAAESLAALSSIAEGDPTLPIE
LDDRLFVSLCFGPSVSARLWLLRNAERFGISTNVLFTVFLGFTKDPYPYVRKEALDGLVG
LCKFGVFEDCSVIEGCYYRGVELLKDPEDCVRCAAVGVVNKWGQMLIAANQEDKRDWSNT
VFMQLCSMVRDMCVGVRIESFSALGNIQMVSEDILLQTLSKKVLSIIKGKKSQSLHTTES
FEILASSAAGAFIHGLEDEFDEVQKSALCSLRKLIVLSSEFAGQALNLLMDMLNANSMVV
RLEALETLHHMATYECLNVQEIHMHMFLGTLIDNNDLIRSAARKIFKLVKLPSLELFRLS
TNGLLESLEIYPQDEAGVFSVLFHIGQNHGNFTACIIKEVSQEIEPVSNGELGLDSIRVA
ALLVLSISVPLSHNQNGQSFPPTLFSYAVTLLGRISSALNDIVDQNTLLAYLSQCSRSYM
SSGMEVEGEESSRPVVNVDIATNTSNPVAMPSMQRGNENSEIHSMISCESGDVGTSIVEC
QLEEHDQIRKSLNLVFAQVKDAWLLVQSSYSSEALKILRACKEKLAIFTPALLENVGALA
LTSQYLHVIKLLVKIWGHVVWKVQSCEIGELEILLGKLERRLREMRCRFIGFSKEEEAHV
LELTLLSCVLRLSKVEICCYLTTLKKLTTTVSCIEFLHKEGSIELSNFVMEVKKTLHEVG
TSIGGVSCSSFMFKKLINHYSAKQFSFSKVTHLYAALSVPGNDFENPLPFIPGLPVAIPL
EITLHNVPRETRLWVRMAMSEDLVQFFFLDLKILGGCDVVRKFTHSIPFYRTPKAGSFAL
SVCIVMELLFEDAHSVKSFGGPKHALVHLCPEEEVYLKMI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcatgtgtggaactcgtgcgaacagtctctcgacaccgataagcctctatct
ccgcaagccctagtttccatgaggtcccttatcattaatcctcacacttccaattctgtt
atctcttcaattctggaaaccctaactcgctctctccagctgtccgctgactcgcttact
caccatcacactctcaagctactcactgagctcgcctcgtaccgcactcatctctcccct
attatattccgctccctcaattctagctcgctcctctccactgactccactctcctagct
gctgagtcactcgccgcactctcttccatcgcagagggcgatccaactttaccgatcgag
ctggatgatcggctctttgtgtcgctgtgttttggtccctcggtgtctgcacgattgtgg
cttctaagaaatgccgagaggtttggtataagtacaaacgtgttgttcactgtgtttttg
gggtttacgaaggatccttatccctatgtgaggaaagaggccttagatggattagttggc
ttgtgtaaattcggagtttttgaagactgtagtgtgatagaaggatgctattaccgtggt
gttgaacttctaaaagatccagaagattgtgtacggtgtgctgcagttggcgtggtcaat
aaatggggtcaaatgcttatagcagccaatcaagaagataaaagagattggtcaaataca
gtattcatgcagctctgttctatggtgagggatatgtgtgtgggagtcaggatagaaagt
tttagtgccctcgggaacatacaaatggtatctgaggatattttgttacaaaccttatct
aagaaggttctatcaatcattaaagggaagaaatctcagagtctacacactacagaaagt
tttgaaattttggcatcaagtgctgctggagctttcattcatgggcttgaagatgaattt
gatgaggtgcaaaagtctgccttgtgctcactgcggaagctcattgtcctttcttctgag
tttgctggtcaggccttaaacctgttgatggacatgctgaatgccaattcaatggttgtc
aggttagaagctctggaaacacttcatcatatggcaacctatgagtgtctaaatgtgcaa
gagatacacatgcatatgtttcttggcactctcattgacaataatgatctaataagatct
gcagcaagaaaaatatttaaattagtgaagctgcctagtctggagttatttagactctct
accaatggccttcttgaaagcttggagatatatcctcaggatgaagcaggtgtcttctct
gttttgtttcatataggtcaaaaccatgggaattttacagcctgcattatcaaagaggtt
tcccaagagatagagccagtttctaatggagaattgggcctggacagcataagagtagct
gcacttcttgtactttctatctcagttccactctcgcataatcagaacggtcaaagtttt
ccacccacattattctcttatgcggttacattgctagggcgtatatcttctgctttaaat
gacattgtggaccagaatactcttttggcatatttatctcagtgcagtagatcttatatg
tcatctggcatggaagttgaaggggaagaatcgtcacggcctgtggttaatgttgatatt
gcaactaatactagcaatcctgttgcaatgccttcaatgcaaaggggcaatgaaaattct
gaaattcattctatgatatcttgtgaatcaggggatgtcgggacttcaattgtagaatgc
cagctggaggagcatgatcaaatcaggaagtctttgaatcttgtatttgcccaggtcaaa
gatgcatggctcttggtacaatcaagttacagcagtgaagcattaaagattttgagggct
tgcaaggaaaagttggccatttttactcctgcattacttgaaaatgttggtgcattggca
ttgacttcgcagtacctccatgtaattaaactgcttgttaagatatgggggcacgttgtg
tggaaggtccagtcttgtgaaataggagagctagagattctcttagggaaactagaaagg
aggctcagagaaatgaggtgtagatttatagggttttctaaagaagaggaggcacatgtt
ttggagcttacacttttgtcatgtgtactaaggttgtccaaagttgaaatctgctgctac
cttaccactttgaagaagctgactacaacagtttcatgtatagaatttcttcacaaggaa
ggatctattgaattgtccaattttgtaatggaagttaagaaaactttgcatgaggtaggc
acttcaataggaggtgtctcctgcagttccttcatgtttaagaagttgattaaccattat
tcagctaagcagttcagtttcagcaaagtaactcatttatatgcagcattgagtgttcct
ggtaatgattttgaaaaccctcttcctttcatcccaggcctacctgtagctataccttta
gagattacgttacacaatgttccaagggagactaggttgtgggtgaggatggcaatgagt
gaagacttggttcagtttttctttttagatttgaagattctcggagggtgtgatgtggtc
agaaaatttacgcattctatccccttttaccgaactcctaaagcaggttcattcgcatta
agtgtttgtatagtaatggaactcttgtttgaggatgcacattcagtaaaaagctttggt
ggtccaaagcatgcattagtccatctttgcccggaagaagaagtttacctgaaaatgatt
tag
DBGET
integrated database retrieval system
