Manihot esculenta (cassava): 110623143
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Entry
110623143 CDS
T05761
Name
(RefSeq) transcription factor MYBC1 isoform X2
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110623143
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110623143
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110623143
NCBI-ProteinID:
XP_021623739
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All DBs
Position
9:702471..705870
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AA seq
324 aa
AA seq
DB search
MREDDSNWFSRWEEELPSPEELMPISQTLITPDLALAFDIRNPTSTATTNTTSLLQQNQP
PPPPAPPPPTATTPSPNNPLQSSQPNSAEYAADSADLVSGAAGDEPARTLKRPRLVWTPQ
LHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGAGG
VNGTGGGGGGGLAAGSDAATEHLFASSPVPAHFLHPGRPNSDHFLPFVPVAALQHHHHQQ
QMAAAAAAVGHPQLQSQYHRQMGHFGQPPNGQFEHPFLARQTQQPVHRMGAPVHNTVPGY
MEDLESASGNGGRKVLTLFPTGDD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagatgattctaattggttttcaaggtgggaggaagagctcccatcacctgaa
gaacttatgcccatatcccaaaccctaattactcctgatcttgcccttgcttttgacatc
cgtaatcctactagtactgccaccaccaacaccacctctcttctacaacaaaaccagccc
cctcctcctcctgcaccaccaccacccaccgccaccactccatctcccaataaccccttg
caatcttcccaacctaattccgctgaatacgccgccgattctgctgacttggtttctggt
gctgcaggtgatgagcctgctagaacacttaagcggccccggctcgtttggaccccccag
cttcataaaaggtttgtggacgccgttgcacacttggggataaaaaatgccgttcccaag
accataatgcagctcatgagtgtagatgggttaactagagagaatgttgctagtcacttg
cagaagtatcggttatatctgaaaaggatgcaggggttgtcatctggtggtgctggtggt
gttaatggcactggtggtggagggggtggtggattggctgcaggatccgatgcagcaact
gaacatttgtttgcaagctctccggtgcctgcgcatttcttgcatccagggaggcctaat
tcagatcatttcttaccgtttgtgccagtggcagcactgcaacatcatcatcaccagcag
cagatggcagcagctgcagctgcagtggggcatccccagttgcagagtcagtatcatagg
cagatggggcactttggtcaacctccaaatgggcagtttgaacatccctttctggctagg
cagacacaacagcctgtgcataggatgggagcgccagtccataacacagttccaggatat
atggaagatttggagtcggcgagtgggaatggcggaagaaaggttctcactctgtttcct
acaggagatgattga
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