Manihot esculenta (cassava): 110623411
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Entry
110623411 CDS
T05761
Name
(RefSeq) polyglutamine-binding protein 1 isoform X1
KO
K12865
polyglutamine-binding protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110623411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110623411
Spliceosome [BR:
mesc03041
]
Complex B
Other components
Prp19 complex
110623411
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WW
WW_TCERG1
Hydrolase_2
WW_USP8
Motif
Other DBs
NCBI-GeneID:
110623411
NCBI-ProteinID:
XP_021624041
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All DBs
Position
9:729097..761792
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AA seq
457 aa
AA seq
DB search
MGEELFQRGENPVPQVYYNPSLYSTEIDIDSVAQNAVLREQEIATQRVLQVQREAGATPK
DDTDIFAERRDPNALKEHLLKMTTEHRAEMALKRRKPAAVEEGHVEIGNGYGVPGGGAYY
GSSRPELNKESEKKSASKELPEYLKQKLRARGILKDDTGNGHPLKDDSKLETSSSQPVNI
GKLPSGWVEAKDPTSGTTYYYNESIGKSQWERPVEMSSITQMPSPLPLEDWVEAVDETNG
QKYYYNTKTNVSQWEHPNSLEIVALQQHCNISDSGNQSWNDQSFELKKCLGCGGWGVGLV
QEWGYCNHCSRVLNIAQCHNTTSSFGEQQRTNNFANVKRDSDKRDSKQRSWKPPVAKGNR
RESRKRAHTEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPG
AVLRKNAEIASQTKKSGSHYAPISKKGDGSDGLGDAD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggaattgtttcagaggggtgaaaatccagtgcctcaagtttattataatcca
tcactatacagcactgaaattgacattgactctgtagcccagaacgccgttctgcgtgag
caagaaattgcaacccaaagagttctacaagttcaaagagaggcaggtgcaactccaaaa
gatgatacagatatttttgctgaacgccgtgaccccaatgctttaaaggagcacctactg
aagatgaccactgaacatcgtgccgaaatggctttaaagcgcaggaagcctgctgctgtt
gaagaaggtcatgtagaaattggaaatggctatggtgttcctggtggaggtgcgtattat
ggttcttcaaggccagaacttaataaagagtcagaaaagaagtctgcttctaaggaactc
cctgagtaccttaaacagaagctgagagcaaggggtattctaaaagatgacacaggaaat
ggccatcctttaaaagacgacagtaagttggagacaagttcaagtcaaccagttaatatt
ggaaagttgccttctggatgggttgaagctaaagatcccaccagcggtactacatattat
tacaatgaaagcattggaaagagtcagtgggaaaggccagttgaaatgtcttcaattaca
caaatgccatcacctctacctctagaagactgggttgaggcagtggatgaaactaatgga
caaaagtattactacaatacaaagaccaatgtgtcacagtgggagcatcctaattcttta
gagattgttgccttacaacagcactgtaacatatcagattctggaaatcagagttggaat
gaccagtcatttgagctaaagaaatgcttgggatgtggtggatggggagtaggccttgtg
caagaatggggctattgcaatcattgctcacgagttctcaatattgcccaatgccacaac
acaacatctagtttcggtgaacaacaacggaccaacaattttgcaaatgtcaaaagagat
tctgataaaagggattcaaagcaaaggtcttggaaacctcctgtggcgaaaggaaatagg
agagagagcagaaagcgtgcccataccgaagatgatgagttagaccctatggacccaagc
tcttattcagatgctccccgaggtggctgggttgttggcctgaaaggggtgcagccacga
gcagctgacactactgctacgggtcctctgtttcagcagcgcccgtacccatctccagga
gccgtcttacgaaagaatgctgaaattgcttcgcaaactaaaaaatctggctctcattat
gcacctatctcaaagaaaggggatgggagtgatgggcttggtgatgcagactga
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