Manihot esculenta (cassava): 110627517
Help
Entry
110627517 CDS
T05761
Name
(RefSeq) probable terpene synthase 12
KO
K12742
isoprene synthase [EC:
4.2.3.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00900
Terpenoid backbone biosynthesis
mesc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110627517
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.27 isoprene synthase
110627517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
PRESAN
DUF5817_CT
DUF8640
HTH_TbsP_C
Motif
Other DBs
NCBI-GeneID:
110627517
NCBI-ProteinID:
XP_043818140
LinkDB
All DBs
Position
12:8411772..8415400
Genome browser
AA seq
548 aa
AA seq
DB search
MNIFLQLSLECVRLIQDLLYKDKARKLEEETRAAIYSENEDFLTILELIDDIQRLGLAFR
FEKDIKRVLDRFVDSEGRNLWTQKSLHATSLMFRLLRQHGYEVSQDEFKNFMDDKDNLLA
IYKKDVKGMLSLYEASSLGFEGEDLLDEAMAQTRTHLINTLQKGNLSELDNSTMEISISH
ALELPLYRRMVMLKARWYIEAYNKRKNANHSLLQLAKINFNMVQSILQRDLKEMSRWWNN
LGLAGKLTFSRDRLMECFFWTVGIEFEPQFSSCRKGLTKVGSFITIIDDVYDVYGTLDEL
ELFTDVVERWDIDAVKDLPEYMKLCFLALYNTVNEMTYDTLAKHGEFVHPYLKKSWADLC
KAFLQEAKWRHKKLTPSFNEYIENGWRSVSGTVILMHAYLLLDQKILKQGLDSLVNHHHI
LKWPSVVFRLCNDLATSSGELDRGETINSISCYMDEHGVSEEYARKEINKMIDNAWKKMN
QYNQTEVNSFTKLFIEASINLARISQCVYQHGDGHGAPDTNSKKRVVSLIIEPISKETLS
YDRCIYND
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttcttgcaattaagcttggaatgtgtacgtttaattcaggacttgctgtac
aaagacaaagcaaggaagttggaggaggaaacaagagcagcaatttatagtgaaaatgag
gatttcttaaccattcttgaactgattgatgacatccaacgtttgggattagcattccgc
tttgagaaggacataaagagagttcttgatagatttgtggattcagaaggacgtaatttg
tggactcagaaatctcttcatgctacttctctcatgttcaggcttcttagacaacatggt
tacgaggtttctcaagatgagttcaaaaatttcatggacgataaggataatcttctggca
atctacaagaaggatgttaaaggaatgctaagtttgtatgaagcttcatctttgggcttt
gaaggagaagatcttttagatgaggcgatggcacaaactagaacacatctcatcaatact
cttcagaaaggaaatctttcagagttggataattctacaatggaaattagtattagtcac
gcactggagcttccattgtatagaagaatggttatgttgaaagcacgttggtatatcgaa
gcatacaataagaggaagaatgcaaatcattccttgcttcaactcgcaaagattaatttc
aacatggttcaatctatactccaaagagatcttaaagaaatgtcaaggtggtggaacaat
ttgggacttgcaggcaaattaaccttcagtagagataggctgatggaatgcttcttttgg
acagttggaatagagtttgaacctcagtttagttcttgccgtaaagggctaacaaaagtc
ggatcatttataaccattattgatgatgtgtatgatgtttatggtacattggatgaattg
gagttgtttacggatgttgttgaaagatgggatatcgatgcagtgaaagatcttccagaa
tatatgaagctatgtttcttagctttatacaatactgtcaatgagatgacttatgatact
ctagcaaaacatggagaattcgtccatccatatctaaaaaaatcatgggctgatttatgc
aaagcattcttgcaagaagcaaagtggagacacaaaaaattgacaccatcatttaatgaa
tatattgaaaatggatggagatccgtatcaggaaccgttatacttatgcatgcctatctt
ttactcgaccaaaaaatcttaaaacaaggtctcgattcattagtaaaccaccatcatata
ttgaaatggccatctgttgtttttcgactttgcaatgatttggcaacttcatcgggtgag
ttagatagaggtgaaacgataaattcaatttcctgctatatggatgaacatggagtttca
gaggagtatgcacgtaaagaaataaataaaatgatagataatgcttggaagaagatgaat
caatataatcaaacggaggtgaattctttcacgaagcttttcattgaagcatctattaat
cttgctaggatttctcaatgtgtataccagcatggagatggacatggagctcctgatacc
aattctaagaaaagagttgtatcattaataattgagccaatttcaaaagaaactttatca
tacgaccgttgtatatataatgattag
DBGET
integrated database retrieval system