KEGG   Manihot esculenta (cassava): 110629110
Entry
110629110         CDS       T05761                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RKP-like isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110629110
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110629110
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110629110
  Multi subunit type E3
   KPC complex
    110629110
SSDB
Motif
Pfam: RKP_N SPRY zf-C3HC4_3
Other DBs
NCBI-GeneID: 110629110
NCBI-ProteinID: XP_021631696
LinkDB
Position
13:18000711..18032765
AA seq 1328 aa
MADDGMRVGGLSSGLAILLSGEDVKENSSKTHLVSYCDDFGCQPVERALEYIFGLPNKSV
GPLTGPVDTDLVRSIIKNKFSKFHVNSDTLASNREGICIFDDGCWPHKVGLEESSICGDI
RIVKPPFLLESLAMFSSTRANVFVWKGKWMYEVILETSGVQQLGWATLSCPFTDHKGVGD
ADDSYAFDGKRVKKWNKEPEPYGQSWVVGDVIGCCIDLDQDEILFYRNGVSLGVAFRGIR
KMGPGFGYYPAISLSQGERCELNFGARPFKYPIRGFLPLQDPPSVNLLATQLLRCLSTMF
DMQYMDRSDSSSVGKLRRLKRFVSLEELFYPVCHGVCEELFCILEADAGNIEYVAWGPLI
SFMMEVFRLQPDHDYSSLDRFIDVFLEFQESCGMFECVINALSSCCRTAALVLTECPYSG
SYSYLALACHILRREELMVLWWKLPDFEFLFEGFLSQKSPSKQDLSILMPSVWWPGSCED
ISYESSMFLTTTALSEAVNKIEEKHRDLCLLVIQFRPPTTPPQLPCSVFRTFLQNLLLKN
RGADRNLPPPGVSSKSVLVSLYTVILHFLSEGFAMRDICGWLKSCETNNYNVGFLHRGGE
QSFLVDLFLKNDSYRTDISRLGGSFSHLSKSHPVHDQESEVIRWEEGCMDDEETRVTHKT
TQKPCCCSSYDVEYSKMSKHPIRYTAKGSRVHCTPMPERSAHIGAECSAGNLNDEIADKP
STSDQSESEFGFCPVQDIRIVPRESNISSATLREEELLDTLLLLYHIGVAPNFKQASYYM
SHQSQSISLLEETDKQIRERGCSEQLRRLKEVHNDYREEVINCVRHCAWYRISLFSRWKQ
RGMYATCMWIVQLLLVLSKVDSLFIYIPEFYLETLVNKFFRETTGKDANVLMNMTLEAHL
CPWCHHNLVHNFDIAANIVKSLANRVDSFHVLRKSDPPFVPSAIFINQGLASFVCLVTFI
VTHFNDPRILSADLKDLLLQSISVLVQYKEYVAVLESNEAATQRMPKALLSAFDNRSWIP
VTNILLRLCKGSRFGSSKYGESSSSVVFQNLLREACANDEELFSAFLNRLFNTLSWTMTE
FSVSIREMQEKHQVSEFQQRKCCVVFDLSCNLARLLEFCTCEIPQAFISGTDTNLRRLTE
LIVFILNHITSAADAEFFDLSFRRHGQLLEKVSRCMILAPLMGIILNLLDANVETESGGQ
NDIVDVFASMDCPDTMHCGFQYLLEYNWQAGSLRGDAYLGKLGQLENFLSLLISRIEVQQ
IEKMRCGETDGDDGICCICYTCKADAKFIPCSHISCYGCITRHLLNCHRCFFCNATVLKV
IKMDENRI
NT seq 3987 nt   +upstreamnt  +downstreamnt
atggcagatgatggcatgagggttggtgggctttcatctggcttggctatattattgagt
ggggaagatgtgaaggagaattcctcgaaaacccatttggtttcatattgtgatgatttt
ggttgtcagcctgtggaacgggctcttgaatacatttttggtctgcctaacaaatcagtt
ggtccattgactggtccagttgacactgatttagtccgctctattatcaagaataagttc
tccaaatttcatgtgaattctgatactttggctagcaatagggaaggaatatgtattttt
gacgatggctgttggcctcacaaagttgggcttgaagaatcaagcatttgtggtgatatt
agaattgttaagcccccttttcttctggagagtttagcaatgttcagtagcaccagggct
aatgtctttgtttggaaaggaaagtggatgtatgaagttatactggaaacttctggtgta
caacagcttggatgggcaaccctgtcttgccctttcactgaccataagggtgtaggcgat
gcagatgattcttatgcatttgatggaaaaagggttaaaaaatggaataaagagcctgag
ccttacggtcagtcgtgggttgttggtgatgtcattgggtgttgcattgatctggaccag
gatgagatattgttttacagaaatggtgtatctcttggggtagcctttcgtggcattcgc
aagatgggacctggatttggatattaccctgcaatctctctttctcaaggcgaaagatgt
gaattaaattttggggctcgaccatttaaataccccattagggggttccttccccttcaa
gatcctccctcagtaaatcttttggctacacaattgcttcgatgcttatccacgatgttt
gatatgcaatatatggatcgatccgatagttcctcagttgggaaattaagaagattaaag
aggtttgtatcacttgaggaactattttatcctgtttgtcatggggtatgtgaggaattg
ttctgtatacttgaggcagatgcagggaacatagagtatgtagcgtggggtccgcttatt
tcatttatgatggaggtcttcaggttgcagccagatcatgactattcaagtttggataga
tttatagatgtgtttctagagtttcaggaatcgtgtgggatgtttgagtgtgtcatcaat
gccctttcgagttgctgcagaacagcagcattggttttaactgaatgcccatactcagga
tcttattcttatcttgcattggcatgtcatattttgagaagggaagaattaatggtactc
tggtggaagttgccagattttgaattcttgtttgaaggttttctatcacaaaagagtcca
agcaagcaggatctttccatcttgatgccttctgtttggtggcctggttcatgtgaggat
atttcctatgaatctagcatgttcttaacaactacagctttatctgaggcagtcaacaag
attgaggagaagcatagggacctctgtcttttggttatacagtttagaccacctacaaca
cctccccagttaccttgttcagtgtttaggacatttttacaaaatcttttattgaagaat
aggggcgcagatcgcaatctgccacctcctggagtttcaagcaagtctgttcttgtctct
ttgtatacagtcatactacattttctatctgaaggatttgctatgagggacatttgtggt
tggttgaagagctgtgaaacaaataattacaatgttggatttcttcatagaggtggtgaa
cagagtttcctggtggatttatttctgaaaaatgattcttatcgaactgacatttcaaga
ctagggggatcatttagtcatctatcaaaatctcatcctgtacatgatcaggaatcagaa
gtaattcggtgggaagaaggctgtatggatgatgaagaaaccagagtaacacataaaact
acgcagaaaccatgttgttgttcaagttatgatgttgagtattcaaaaatgtcaaagcat
ccaattagatatacagcaaaaggttctcgtgtccattgtacacctatgccagagaggtct
gctcatataggtgcagaatgcagtgcaggaaatttgaatgatgaaattgcagataagcct
agcaccagtgatcaatctgagtcggagtttggtttttgcccagtgcaagatattaggatt
gtgccaagggagagtaatatctcttcagctacactaagagaagaagaacttttagatact
ttgttacttttgtatcacataggcgttgcgccaaacttcaaacaggcatcatactacatg
tctcatcaatcacaatcaatatcgcttctggaagaaactgataagcaaataagagaaaga
ggttgtagtgaacaattacgacgattgaaggaagtgcataatgattatcgagaagaagtt
atcaattgtgttagacattgtgcatggtatcgcatctccctattctcacgttggaagcag
agaggaatgtatgcaacatgcatgtggatagtccaactgctcctggttcttagcaaagtg
gattctttattcatttatatccctgaattttatcttgaaactctggtaaataagttcttc
cgtgaaactactgggaaggatgctaatgtgcttatgaacatgacattagaagcacactta
tgtccttggtgtcaccacaatcttgttcacaactttgatattgctgcaaatattgttaaa
tctcttgcaaatcgagttgactcttttcatgtgttgcgcaagagtgatcctccatttgtt
ccttctgcaatatttattaaccaaggactcgcatcatttgtatgtttggtcactttcata
gttacccacttcaatgacccaaggatattgagcgcagatctcaaggatctccttctccaa
tctatatcagtcttggtacagtacaaggaatatgtggcagttttggagagcaatgaagca
gccacgcagagaatgccaaaagcattgctgtcagcttttgataacagatcttggattcca
gtcaccaacattcttctgcgattgtgcaagggttctcgctttggttcttcaaaatatgga
gaatcatcatcatcagttgtttttcagaacttgttgcgggaagcttgcgccaatgatgaa
gaattgttctcagcctttctgaatcgcctatttaatactcttagctggacaatgacagag
ttctctgtttctattcgggaaatgcaagaaaaacaccaggtatcggagtttcagcaaagg
aaatgctgtgtagtatttgatctctcatgcaaccttgcaaggcttttggagttctgtacc
tgtgagattccgcaagcattcatatcaggaactgatacaaacctccggaggttaactgaa
ttaattgtttttattctcaaccacataacttccgctgcggatgctgaattttttgacttg
tcatttcgaagacatggtcaattgttggaaaaagtaagtcgatgcatgatattagcacct
cttatggggatcattttgaatttgttggatgcaaatgtggagacagaatctggagggcag
aatgatattgtagatgtttttgctagcatggactgccctgataccatgcattgtggattc
cagtatctcttggagtataactggcaggctggttcactcagaggggatgcctatctggga
aagcttgggcaacttgagaacttcttgagccttcttatcagccgaattgaggtgcaacaa
attgaaaagatgagatgtggagaaacagatggagatgatggcatctgctgcatttgttat
acatgtaaagcagatgcgaagtttattccttgttctcatatctcttgctatggctgcatc
acaagacatcttttgaattgccatagatgtttcttttgcaatgcaacggtgttgaaggtc
attaagatggacgaaaacagaatctaa

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