KEGG   Manihot esculenta (cassava): 110629427
Entry
110629427         CDS       T05761                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110629427
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    110629427
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD ERCC3_RAD25_C HDA2-3 RHH_ERCC6L2 SWI2_SNF2 POPLD
Other DBs
NCBI-GeneID: 110629427
NCBI-ProteinID: XP_021632084
LinkDB
Position
13:complement(35847350..35852847)
AA seq 901 aa
MSISTFKAFKETLKSCKNISSSTSSSSASLFAESLSQEPEPGIVFPRKPPKSTLSKQLQR
LGDSFSSLQQSQSQSFETQQPGRLPSLRNQSQVEKNEDEVEEEEKEERKFENFAKPELGQ
VQFDHTGPFEPLILSLPGEVPIVQVPASINCRLLEHQREGVKFLYKLHRNNHGGVLGDDM
GLGKTIQTIAYLAAVFGKDGDSADSIILRDDQVCKKGPVLIICPTSVIHNWETEFSRWST
FKVALYHGANRDLILERLEAGGAEILITSFDTYRIHGSILSELKWEIVIVDEAHRLKNEK
SKLYGACLEVKTRKRIGLTGTIMQNKIMELFNLFDWVAPGLLGTKEHFREFYDEPLKHGQ
RATAPERFIRIADERKEHLVAVLRKYMLRRTKEETIGHLMLGKEDNVVFCAMSELQKRVY
RRMLQIPEIQCLINKDLPCGCGSPLKQVECCKRIVPDGIIWSYLHRDNPEGCDSCPFCLV
LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEFASSVFGTDIDLVGGNAQTQSFMGLSD
VKHCGKMRALEKLMSSWTSRGDKLLLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPTNLR
QSMVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAYDLQAQDRSFRFGQK
RHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKQFQGELFGVCN
LFRDLSDKLFTSEIIELHEKQGKDDGNCSTMTNELPEIMSCFLPQKQVGATIVSKSENNR
SIDDESATTNKPVLEELGILYAHRNEDIINCGPGMRKSKVESIPEVVSLAAPAKRRRKSD
DAGEKENALSSKDQKRIQYSLLAQFMGMGEVEFSKWVLSATHAERENVLQQFKKRKKVAN
G
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgtcaatctccactttcaaagccttcaaagaaaccctaaagtcctgtaaaaatatatcg
tcttcaacatcttcgtcctcagcttcactttttgcagaatcattatctcaagaaccagaa
cccggaatagtttttcccagaaaacctccaaaatctactctttcgaagcaacttcaacgt
cttggagactctttctcttcgctacaacaatctcaatcccaatccttcgagacccaacag
cccggaaggcttccgagcctcagaaaccaatcccaagttgagaaaaatgaagatgaagtg
gaggaagaagaaaaggaggaaagaaaatttgagaattttgcaaaaccagaattgggtcag
gttcagtttgatcatacaggaccctttgagccattgatcctttcgttgcctggagaagta
ccaattgtacaggttcctgcttctatcaactgtaggttgcttgaacatcaaagggaggga
gtaaaattcttatataagctacacagaaacaatcatggaggtgttcttggtgatgacatg
gggctgggcaagaccatacagacaattgcatatctggctgctgtttttgggaaagatggg
gattctgctgactccataatattaagggatgatcaagtatgtaaaaaaggccctgtgcta
ataatttgtcccacctctgtcatccacaactgggagactgaattctctaggtggtcaacc
tttaaggttgctctttaccatggtgcgaaccgtgatttgattcttgagagattagaagct
ggtggagccgaaatactgattaccagttttgacacatacagaattcatgggagcattctg
tcggagttgaaatgggagattgtaattgtcgatgaagcacaccggcttaaaaatgagaaa
tcaaaattgtatggagcatgtttagaagttaaaactaggaaacgaattggtttaacagga
actattatgcagaataaaattatggaactttttaatctctttgactgggttgcacctggt
ttgttgggaacaaaagaacattttagggagttctacgatgaacctcttaagcatggccag
agggcaactgcacctgaaagattcatccggattgctgatgagcgtaaagaacacctagtg
gcggttcttcgtaaatatatgcttaggaggacaaaggaggagactattgggcatcttatg
ttgggaaaggaagataatgtcgtattttgcgccatgagtgaattacaaaaacgcgtttat
aggagaatgttacaaataccagagatccagtgccttataaataaggaccttccatgtggc
tgtggtagccctcttaaacaagtggagtgctgcaaaaggattgtacctgatggaattata
tggtcttaccttcacagggataaccctgaaggttgcgattcttgccctttttgccttgta
cttccttgccttgtcaagctccaacagataagcaatcacctggagttgattaagcctaac
cctagggatgaaccagacaagcaaaggaaagatgcagaatttgcctcttctgtctttggt
actgacatagatttggtgggaggaaatgcccagactcagagtttcatgggcctgagtgat
gttaaacattgtggaaaaatgcgggcattggagaagttaatgtcctcttggacttctcgg
ggagacaaacttcttctctttagttactcggtcaggatgcttgacatattggaaaagttt
ctcatacgcaaagggtatagcttttcaagacttgacggttctactccaactaacttgcgc
caatccatggtggatgacttcaactcaagcccaagcaaacaggtgttcctcatctcaact
cgagctggtgggcttgggttgaatcttgtaagtgcaaatcgtgtggttatatttgatcca
aactggaatcctgcctatgatttacaggcccaggacagatcttttcgttttggacagaag
cggcatgttgtagttttccgccttcttgcagctgggtcatttgaggaacttgtttattcc
cgtcaagtgtacaaacaacagctgtcaaatattgctgtttcagggaaaatggaaaaacgt
tattttgagggcgtccaggattgtaagcaatttcagggtgaactttttggagtctgcaat
ctgttccgtgatctatctgataagctttttaccagtgaaatcattgaattgcatgagaaa
cagggaaaagatgatgggaattgctctactatgacgaatgaactgcctgaaattatgagc
tgttttcttcctcagaagcaagtaggcgcaaccattgtatcaaagtcagagaacaacagg
tcaattgatgatgagagtgctacaacaaataaacctgtgctcgaggagttgggtattctg
tatgctcaccgtaacgaggacataatcaattgtgggcctggcatgagaaagagcaaggta
gaaagcatccctgaagttgttagcttggcggcccctgctaagcggagaagaaaatcagat
gatgcaggtgaaaaagaaaatgccttgtcatccaaggatcagaaaaggattcaatatagc
cttcttgcccaattcatgggtatgggagaggttgaatttagcaagtgggtattgtctgca
actcatgcagaaagggaaaacgtacttcaacaatttaagaagagaaagaaggttgccaat
ggttga

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