KEGG   Manihot esculenta (cassava): 122722127
Entry
122722127         CDS       T05761                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3
  KO
K07936  GTP-binding nuclear protein Ran
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03008  Ribosome biogenesis in eukaryotes
mesc03013  Nucleocytoplasmic transport
mesc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122722127
   03008 Ribosome biogenesis in eukaryotes
    122722127
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122722127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    122722127
   03009 Ribosome biogenesis [BR:mesc03009]
    122722127
   03016 Transfer RNA biogenesis [BR:mesc03016]
    122722127
   03036 Chromosome and associated proteins [BR:mesc03036]
    122722127
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    122722127
   04031 GTP-binding proteins [BR:mesc04031]
    122722127
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     122722127
Ribosome biogenesis [BR:mesc03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    122722127
  Pre-60S particles
    122722127
Transfer RNA biogenesis [BR:mesc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122722127
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122722127
   Spindle formation proteins
    122722127
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122722127
GTP-binding proteins [BR:mesc04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    122722127
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 122722127
NCBI-ProteinID: XP_043807956
LinkDB
Position
16:32269062..32271717
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctctaccaaatcagcagactgttgattatcctagcttcaagcttgtgattgttggc
gatggtggtacagggaaaactacctttgttaaaagacatcttacaggcgagtttgagaag
aaatatgagccaaccattggtgtggaagttcatcccttggacttctttacaaactgtggg
aaaatccgattctactgctgggacacagctggacaagagaagtttggcgggcttagggat
ggatattacatccatggccaatgtgctataatcatgtttgatgtaactgcccgattgacg
tataagaatgtgcccacatggcatcgggatctttgcagggtctgtgaaaatatccctatt
gttctttgtggaaacaaggttgatgtgaaaaacaggcaggttaaggcaaagcaggtcaca
ttccacaggaaaaagaacttgcaatactatgagatttcagcaaagagcaattacaatttt
gagaagccttttctttatctcgcaagaaaacttgctggggatcctaatttgcattttgtt
gagtctccagccctggcacctccggaggtgcaaattgacctggcagctcaacaacagcat
gaggctgagcttgctgctgcagctagtcaacctcttccagatgacgatgatgacacattt
gagtaa

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