Manihot esculenta (cassava): 122723532
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Entry
122723532 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122723532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
122723532
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122723532
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122723532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_11
FUSC-like
Motif
Other DBs
NCBI-GeneID:
122723532
NCBI-ProteinID:
XP_043811909
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All DBs
Position
4:1775615..1779045
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AA seq
279 aa
AA seq
DB search
MSTEFEAQSNFTESGNYGCSHYRRKCKIRAPCCNEVFDCRHCHNEAKNSLETNPLDRHDI
PRHDVTKVICSVCGTEQDVQQNCINCGVCMGKYFCAKCKFFDDDIAKNQYHCDECGICRT
GGQENFFHCKQCGCCYSKLMKDAHRCVERAMHHNCPVCFEFLFDTMKDITVLPCGHTIHL
ECVREMEQHYRYSCPVCSKSICDMSRLWRKLDQEIAATPMPDIYQNKMVWILCNDCGANS
HVRFHIVAHKCLSCKSYNTRQTQGGAGGSCSSGMAEMVR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgagtttgaggcacaatccaactttactgaatctgggaattatgggtgttcc
cattacaggagaaaatgcaagatcagagcaccttgttgcaatgaggtatttgattgcaga
cattgtcataatgaagctaagaactccttggaaactaatcctctggatcgacatgatatt
ccacgtcatgatgttactaaggtcatatgctccgtctgtggcacagaacaagatgttcag
cagaattgcataaattgtggagtttgtatggggaagtacttctgtgcaaagtgcaaattc
ttcgatgatgatatcgcaaagaatcaataccactgtgatgaatgtggcatatgcagaact
ggtggtcaggaaaatttcttccattgtaaacaatgtggatgttgctattcaaagttaatg
aaagatgcccaccgttgcgtggaaagagcaatgcaccacaattgccctgtttgctttgag
tttctgtttgacactatgaaagatataactgtgttgccttgtggacatacgatacatttg
gaatgtgtgagagagatggaacagcattacaggtactcatgcccagtgtgctccaagtcc
atctgtgacatgtccagattatggagaaagcttgatcaagagattgctgcaactccaatg
cctgatatttaccaaaataaaatggtgtggattctctgcaatgattgtggtgcaaactcc
cacgtaagattccatatagtggcgcataaatgtctaagctgcaagtcctacaatacccga
cagacacaaggaggcgcaggcggatcttgctcgtcaggcatggctgaaatggtgagatga
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