Methylocystis sp. SB2: LNB28_06555
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Entry
LNB28_06555 CDS
T10237
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00020
Citrate cycle (TCA cycle)
mesz00270
Cysteine and methionine metabolism
mesz00620
Pyruvate metabolism
mesz00630
Glyoxylate and dicarboxylate metabolism
mesz00680
Methane metabolism
mesz00710
Carbon fixation by Calvin cycle
mesz00720
Other carbon fixation pathways
mesz01100
Metabolic pathways
mesz01110
Biosynthesis of secondary metabolites
mesz01120
Microbial metabolism in diverse environments
mesz01200
Carbon metabolism
Module
mesz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mesz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mesz_M00168
CAM (Crassulacean acid metabolism), dark
mesz_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LNB28_06555 (mdh)
00620 Pyruvate metabolism
LNB28_06555 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
LNB28_06555 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LNB28_06555 (mdh)
00720 Other carbon fixation pathways
LNB28_06555 (mdh)
00680 Methane metabolism
LNB28_06555 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LNB28_06555 (mdh)
Enzymes [BR:
mesz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LNB28_06555 (mdh)
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GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
F420_oxidored
Glyco_hydro_4C
Motif
Other DBs
NCBI-ProteinID:
ULO25044
LinkDB
All DBs
Position
complement(1320801..1321763)
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AA seq
320 aa
AA seq
DB search
MSRRKIALIGAGNIGGTLAHLAGLKELGDIVLFDIVDGVPQGKALDIAQSSPVAGFDAKL
TGGSDYSAIEGADVVIVTAGVPRQPGMSRDDLLSVNLGVIAKVGAGIKRYAPNAFVICIT
NPLDVMVWALQKASGLPTQRIVGMAGMLDSSRFRYFLAEELNVSVEDVSAFVLGGHGDDM
VPSVRYSTVAGVPLPDLVAMGWTTQARIDAIVERTRKGGGEIVGLLKTGSAYYAPATAAI
AMAESYLKDKRRVMPCAAYLTGQYGVNGLYVGVPVVIGANGVERVMEIKLDAAERAMFEK
SVASVRTLLEAAKALDPAFA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaagaaaaatcgctttgattggcgccggcaatatcggcggaacgcttgcccat
ctcgccggcctcaaggaactcggcgacatcgttcttttcgacatcgtcgacggcgtgccg
caaggcaaggcgctcgacatcgcccaatcgtctcccgtcgcgggtttcgacgccaaactc
accggcggctccgactattcggcgatcgagggggcggacgtcgtcatcgttacggccggc
gtgccgcgccagccgggcatgagccgcgacgatcttctgtcggtcaatctcggcgtcatc
gccaaggtcggcgcgggcatcaagcgctatgcgccgaacgcctttgtcatctgcatcacc
aatccgctcgacgtcatggtgtgggcgctgcagaaggcgtccggcctgccgacgcagcgc
atcgtcggcatggcgggcatgctcgattcttcgcgctttcgctatttcctggccgaggag
ctcaatgtctcggtcgaagacgtgagcgccttcgttctgggcggccatggcgacgacatg
gtgccgtcggtgcgctattcgacggtggccggcgtgcctttgccggatctcgtggccatg
ggttggaccacgcaggcgcgcatcgacgcgatcgtcgagcgcacgcgcaagggcggcggc
gagatcgtcggccttctcaagaccggctccgcatattatgcgccggcgaccgcggcgatc
gccatggccgagagctatctcaaggacaagcggcgggtgatgccctgcgccgcctatctc
accggccagtatggcgtgaacggactctatgtcggcgttcccgtggtcatcggcgcgaac
ggcgtcgagagggtgatggagataaagctcgacgcggccgagcgggcgatgtttgaaaaa
tccgtcgcctcggttcggacgctgctggaagccgccaaggcgctcgatccggctttcgcc
tga
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