Methylocystis sp. SB2: LNB28_15610
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Entry
LNB28_15610 CDS
T10237
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00300
Lysine biosynthesis
mesz00550
Peptidoglycan biosynthesis
mesz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LNB28_15610
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LNB28_15610
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mesz01011
]
LNB28_15610
Enzymes [BR:
mesz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LNB28_15610
Peptidoglycan biosynthesis and degradation proteins [BR:
mesz01011
]
Precursor biosynthesis
Amino acid ligase
LNB28_15610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ULO23537
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Position
3208300..3209751
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AA seq
483 aa
AA seq
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MLISELLATPDLEPALRGLAVSGLTADSRMARSGFAFFAIPGHAGDGMSYVADAKSRGAC
VVVAQRRADSPLPLVVVDDVRRALALAAARFFSRQPSMIAAVTGTSGKTSVVAFLRQIWA
ALGHEAASLGTVGIVDSRGAHYGALTTPGPVELHRTLDELAGRGVTHLAMEASSLGIDQR
RLDGMRVDVAGFTNFSRDHLDHHADMEEYFAAKMRLFDTLLHPGQTAVIDADSDIASRVI
EICRARSLTILSVGSKGETIKLLSATPSALATSLRLRHNGADYEVNLPLAGAFQVSNALV
AAGLAIASGDDPGQVFAALEALKGAPGRLELVGQRNGAPIFVDYAHKPDALEKVLATLRP
LTKKRLIVVFGCGGDRDRGKRPLMGDIVARAADVAIVTDDNPRSEDAAAIRAEILEGTRS
GAAHIIEIGDRRAAIANAVAGLEVGDALVVAGKGHETGQIVGDRVLPFSDHEAIAQALKE
NHP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcggaactgcttgcgacgccagaccttgagcccgccttgcgcgggcttgcc
gtctccggcctgacggctgacagtcgaatggcgcgcagcggctttgccttttttgccatc
ccgggccacgccggcgacggcatgtcctatgtcgccgacgcgaagtcgcgcggcgcctgc
gtcgtcgtcgcgcagcggagagctgacagcccgctgccgcttgtcgtcgtcgatgacgtt
cgacgcgccctagccctcgccgccgcgcgtttcttctcgcgtcagccgtcgatgattgcg
gcggttacgggaacgagcggcaagacgtcggtggtggccttcttgcgtcagatctgggct
gcgcttggacatgaggcggcgtcgctcggcaccgttggaatcgtcgattctcgcggcgcg
cattatggagcgctgacgacgcccggcccggtcgaattgcaccgaacgctggacgaactg
gctggacgcggcgtgacgcatctcgcgatggaggcgtcgtcgctggggatcgatcagcgg
cggctcgacggcatgcgcgtcgacgtcgcgggcttcaccaatttctcgcgcgaccatctc
gaccatcacgccgacatggaggagtatttcgccgcgaagatgcggctcttcgacacgctg
ctgcaccctggccagacggcggtgattgacgccgacagcgacattgcgtcccgcgtcatc
gaaatctgccgcgcgaggagcctcacaattttgagcgtcggttcgaagggagagacgata
aagctcctttcggcgacgccgtccgccttagcgacgtcgctgcggctccgccataatggc
gcagactatgaggtcaatctgccgcttgccggcgccttccaggtctcgaacgcgctcgtc
gccgcggggttggccatcgcaagcggcgatgacccggggcaggtctttgcggcgctcgaa
gcgctcaaaggggcgccggggcggctcgaactcgtcggtcagcgtaacggcgcgccgatt
ttcgtagattacgcccataagcccgacgcgcttgagaaagtgctcgccactttacggccg
ctgacaaaaaaacgcctgattgtcgtcttcgggtgcggcggcgatcgtgatcgtggcaag
cgcccgctgatgggggacatcgtcgcccgcgcggcggatgtcgccatcgtcacggacgac
aatccgcgcagcgaggacgccgccgccattcgcgcagaaattctcgaaggaacccgtagc
ggcgcggcgcatatcatcgagatcggagaccggcgcgcggcgatcgccaacgcggtcgcg
ggacttgaagtgggcgatgcgctcgtcgtggctggaaaaggccacgaaaccgggcagatc
gtcggcgaccgcgttttgcctttctccgatcatgaggcgattgcgcaggcgctcaaggag
aatcatccatga
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