Methylobacterium sp. DM1: C0214_25490 Help Entry C0214_25490       CDS       T05461                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism metd  Methylobacterium sp. DM1 Pathway metd03030   DNA replication metd03410   Base excision repair metd03420   Nucleotide excision repair metd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:metd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C0214_25490    03410 Base excision repair     C0214_25490    03420 Nucleotide excision repair     C0214_25490    03430 Mismatch repair     C0214_25490  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:metd03032]     C0214_25490    03400 DNA repair and recombination proteins [BR:metd03400]     C0214_25490 Enzymes [BR:metd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C0214_25490 DNA replication proteins [BR:metd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C0214_25490 DNA repair and recombination proteins [BR:metd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C0214_25490    NER (nucleotide excision repair)     GGR (global genome repair) factors      C0214_25490    MMR (mismatch excision repair)     DNA ligase      C0214_25490   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C0214_25490 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH_5 5_3_exonuc Motif Other DBs NCBI-ProteinID:  AWI91250 LinkDB All DBs Position complement(5405778..5408225) Genome browser AA seq 815 aa AA seqDB search MPRTHPSAAVETLSEEAAESRHAELSRAIERANHLYYNEDAPELTDAEYDALRQELEAIE ARFPALTGTTEASAGVGAKPSEKFAKVRHAVPMLSLGNAFADEDVEEFVARVRRFLNLSA EEPVAFTAEPKIDGLSLSLRYEAGKLVTAATRGDGEVGENVTANALTVDDIPERLSGDGI PQVLEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFA YAWGEVSEPFADTQSAVLERFRGWGLPVNPRTKLCRSAEEMIAHYRAIEAERAGLGYDID GVVYKVDDLGFQRRLGFVSRAPRWALAHKFAAQEAITELLAIDINVGRTGSLNPLARLKP VTVGGVVVSNATLHNEGYVQGVGADGEPIREGRDIRVGDTVIVVRAGDVIPKVMDVVLDK RPADAVPFVFPETCPACGSRAVRELNPRTKKIDAVRRCTGGLICPAQGVERLKHFVSRNG FDLEGFGQTYIEVLFEAGVVKQPADLFRLQFEPLKAAIVARREALSAQRRAEGEAAPKKP TKKKGEEEDKAIKNLLASLDARRTIPLNRFLFALGIPQIGESTAKALAKRFPDMPALMAA LDAATKAQAGRDWLELSALPRIGPGTRDRLFETLDPLPGEAMQDLSLGARLRGRLTASQR EAVLAHYGSEAEADAALERAASQRPGDAYRLFADDGEIGPVATDSLIQFFSEPHNDAAVR ALLEEVTTEMLAAPTTSAAAFAGKTVVFTGTLEKMTRSEAKATAERLGAKVSGSVSAKTD LVVAGPGAGSKLKDAERHGVRVVSEDDWLAMLAEV NT seq 2448 nt NT seq  +upstreamnt  +downstreamnt atgccgcgcacgcacccttccgccgctgtcgaaactctgagcgaggaggccgccgagtcg cgccatgccgagctgtcgcgggcgatcgagcgggcaaaccacctctactacaacgaggac gcgcccgaactcacggatgccgagtacgacgccctgcgccaggagctggaggcgatcgag gcgcgcttccccgcgctcaccggcaccaccgaggcgagcgcgggcgtcggcgccaagccc tcggaaaagttcgccaaggtccggcacgccgtaccgatgctgtcgctcggcaacgccttc gccgacgaggatgtggaggaattcgtcgcccgcgtgcgccgcttcctcaacctttccgcc gaggagccggtggccttcaccgccgagccgaagatcgacggcctgtcgctttcgctgcgc tatgaggcgggcaaactcgttaccgccgccacccgcggcgacggtgaggttggcgagaac gtcaccgccaatgcgctgacggtggacgacattcccgagcgtctgtcgggcgacggtatt ccccaagtgctggaggtgcgcggcgaggtctatctctcacacgccgatttcgccgccatc aacgcgcgccaagaggcggccggcaagccgctcttcgccaacccgcgcaacgccgcggcc gggtcgctgcgtcagctcgatccggcgatcaccgcctcgcgccccctgcgcttcttcgcc tatgcctggggcgaggtctcggagcccttcgccgacacgcaatcggcggtgctggagcgc ttccggggctggggcctgccggtcaatccgcggaccaagctgtgccgctcggccgaggag atgatcgcgcattaccgcgccatcgaagcggagcgggccggcctcggctacgacatcgac ggcgtcgtctacaaggtagacgatctcggcttccagcgccggctcggcttcgtcagccgg gcgccgcgctgggcgctggcgcacaaattcgcggcccaggaggcgatcaccgaacttctg gctatcgacatcaatgtcggccgcaccggatccctcaacccgctggcgcggctcaagccc gtgaccgtcggcggtgtcgtggtctcgaacgccaccctgcacaacgagggctacgtccag ggcgtcggcgccgacggcgagccgatccgcgagggccgcgacatccgcgtcggcgacacc gtgatcgtggtgcgcgcgggtgacgtgatcccgaaggtgatggacgtggtgctcgataag cgcccggccgacgccgttcctttcgtcttccccgagacctgcccggcctgcggcagccgg gcggtgcgcgaactcaacccgcgcacgaaaaagatcgacgcggtccgccgctgcaccggc gggctgatctgcccggcgcagggggtggagcggctgaagcacttcgtctcccgcaacggc ttcgacctcgaaggcttcggccagacctatatcgaggtgctgttcgaggcgggtgtcgtg aagcagcccgccgacctgttccgcctgcaattcgaaccgctgaaggcggcgatcgtcgcc cggcgcgaggcgctctcggcccagcgccgggccgagggcgaagcggcgccgaagaagccg acgaagaagaagggcgaggaggaggacaaggcgatcaagaatctgctcgcctcgctcgac gcccgccgcacgatcccgctcaaccgctttctgttcgcgctcggcattccgcagatcggc gagtcgaccgccaaggccttggccaagcgcttccccgatatgccggcgctgatggcggcg ctcgacgcggcgacgaaggcgcaggcaggccgcgactggctcgaactctcggcgctcccc cggatcggaccgggcacccgcgaccggctgttcgagaccctcgatccgctgccgggcgag gcgatgcaggatctgagcctcggcgcccgcctgcgcggccggctgacagcctcccagcgc gaggcggtgctcgcccattacggcagcgaggcggaggccgacgcggccctggagcgggcc gcctcgcagcggcctggcgatgcctaccgcctgttcgccgacgacggcgagatcggcccc gtggcgacggattcgctgatccagttcttctccgagccgcacaacgacgcggcggtgcgg gcgctgctcgaagaggtgaccaccgaaatgctggccgcccccaccacctcggcggcggcg tttgccggcaagacggtggtgttcacagggaccctcgagaagatgacccgcagcgaggcc aaggccaccgccgagcgcctgggcgccaaggtctcgggctcggtctcggccaagaccgac ctcgtcgtcgccggccccggcgccggttcgaagctcaaggacgccgagcggcacggggtg cgcgtggtctcggaggacgattggctggcgatgctggccgaggtgtaa

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