Methylibium sp. Pch-M: C1M51_15525
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Entry
C1M51_15525 CDS
T05827
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
metp
Methylibium sp. Pch-M
Pathway
metp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1M51_15525 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metp03400
]
C1M51_15525 (nth)
Enzymes [BR:
metp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1M51_15525 (nth)
DNA repair and recombination proteins [BR:
metp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1M51_15525 (nth)
Prokaryotic type
C1M51_15525 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QAZ40724
UniProt:
A0A4P6GZX6
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All DBs
Position
3247757..3248395
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AA seq
212 aa
AA seq
DB search
MKPADVETFFATLKAANPQPASELVYSSVFELLAAVLLSAQATDVSVNKATRRLFAVAPS
PQKMLALGLDGVIEHIKTIGLFRSKAKHLLETCRLLIERHGGRVPRSREALEALPGVGRK
TANVVLNVAFGEPTLAVDTHIFRVGNRTGLAPGKTPLAVELKLLQRVPAAYLEDAHHWLI
LHGRYVCQARKPRCWECAVAAVCDFRPKTPRP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgccgacgtcgagaccttcttcgccaccctgaaggcggccaacccgcagccg
gcgagcgagctggtctacagctcggtgttcgagctgctggccgcggtgctgctgtcggcc
caggccaccgacgtgagcgtcaacaaggcgacacggcgattgttcgcggtggcgccgtcg
ccgcagaagatgctggcgctcggcctcgacggcgtgatcgagcacatcaagaccatcggc
ctgttccgcagcaaggccaagcacctgctggagacctgccgcctgctgatcgaacggcac
ggcggccgcgtgccgcgctcgcgcgaggcgctggaggccctgcccggcgtcggccgcaag
accgccaacgtggtgctgaacgtggccttcggcgagccgacgctggcggtcgatacccac
atcttccgcgtcggcaaccgcaccggcctcgcgccgggcaagacgccgctggcggtggag
ctgaagctgctgcagcgcgtacccgcggcctacctggaagacgcgcaccactggctgatc
ctgcacggccgctacgtgtgccaggcgcgcaagccgcgctgctgggagtgcgcagtcgcg
gccgtgtgcgacttccggcccaagaccccccggccctga
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