Methylorubrum sp. GM97: MSPGM_34120
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Entry
MSPGM_34120 CDS
T10720
Symbol
crtI_2
Name
(GenBank) phytoene desaturase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00906
Carotenoid biosynthesis
metq01100
Metabolic pathways
metq01110
Biosynthesis of secondary metabolites
Module
metq_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
MSPGM_34120 (crtI_2)
Enzymes [BR:
metq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
MSPGM_34120 (crtI_2)
1.3.99.28 phytoene desaturase (neurosporene-forming)
MSPGM_34120 (crtI_2)
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
MSPGM_34120 (crtI_2)
1.3.99.31 phytoene desaturase (lycopene-forming)
MSPGM_34120 (crtI_2)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Pyr_redox_2
HI0933_like
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox
Pyr_redox_3
GIDA
Lycopene_cycl
NAD_binding_7
NAD_binding_9
ThiF
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
BDL40822
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Position
complement(3716262..3717854)
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AA seq
530 aa
AA seq
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MLQSREGLRTLSGRRTIVVGAGPGGLATALLLAKAGLHVTLIEKDAQVGGRTKTVAAPGG
YRFDIGPTFFLYPQILADIFESCGERLEDHVRLERLDPQYNLVFEGEGGISGQIRATGDV
PRLKAEIARLAPADAENVEKFFEENRTKLNYFKPVLEQPFDNILSMASPAMLAALPHLHP
GRSVDRDLKRYFADPRVRLAFSFQTKYLGMSPFRCPSLFTILSFLEYEHGVYHPVGGCGA
VSEAMAGLARRMGVDIRLGQSVERILFEGKRATGVFVGGETLKADAVVVNGDFAKVIRDL
VPEERRPRWRDAKIGKARLSCSTYMLYLGIEGKMPESLGHHTILLAKEYERNIKEITGGT
LPMEPSIYVQHAGFTDGGMAPPGHTALYVLVPVPNLKAGIDWETVGPTYRKLILERLKLL
GLPDIESRIRYERVVDPRDWRDEFAVHEGATFNLAHDLMQMLWFRPHNRFGPGLYLVGGG
THPGSGLPVIYEGARISARLLIEDLAKEKAPAILADLPTTSPLATQGDPS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcagtcgcgggaaggtttgcgtaccctgtcgggccgccgcacgatcgtcgtcggg
gccggccccggcggccttgccacggcgctgctcctggccaaggccggactgcacgtcacg
ctgatcgagaaggacgcccaagtgggcgggcgcaccaagaccgtggcggcgccgggcggc
taccgcttcgacatcggcccgaccttcttcctctatccgcagatcctcgccgacatcttc
gaatcctgcggcgagcgcctggaggaccatgtccggctggagcggctcgacccgcaatac
aacctcgtcttcgagggtgagggcggcatttcggggcagatccgcgccaccggcgacgtg
ccgcggctgaaagccgagatcgcccgcctcgcccccgccgacgccgagaacgtcgaaaag
ttcttcgaagagaaccggaccaagctgaactacttcaagccggtgctggaacagcccttc
gacaacatcctgtcgatggcgagcccggcgatgctggccgccctgccccatctccatccc
ggccgcagcgtggaccgggatctcaagcgctatttcgccgacccgcgggtgcgcctcgcc
ttctcattccagaccaaatatctcgggatgagccccttccgctgcccgagcctgttcacg
atcctctcgttcctcgaatacgagcatggggtctaccacccggtcggcggctgcggcgcg
gtctcggaggcgatggcggggctggcccgccgcatgggcgtcgacatccgcctggggcaa
tcggtcgagcggatcctgttcgagggcaagcgcgccaccggcgtgttcgtcggcggcgag
acgctgaaggccgatgcggtcgtcgtgaacggcgacttcgccaaggtgatccgcgatctc
gtgccggaggagcggcgcccgcgctggcgcgacgccaagatcggcaaggcgcgcctctcc
tgctcgacctacatgctctacctcggcatcgagggcaaaatgcccgagagcctgggccac
cacaccatcctgctggccaaggaatacgagcgcaacatcaaggagatcaccggcggcacg
ctgccgatggagccttcgatctacgtgcagcatgccggcttcaccgatggtggcatggcg
ccgcccggccataccgccctctacgtgctggtgccggtgccgaacctgaaggcgggcatc
gattgggagacggtcggcccgacctaccgcaagctgattctggagcgattgaagctcctc
ggccttcccgacatcgagagccgcatccgttacgagcgcgtggtcgatccccgcgactgg
cgcgacgagttcgcggtgcatgagggcgcgaccttcaacctcgcccacgatctcatgcag
atgctgtggttccgcccccataaccgcttcgggccggggctctacctcgtcggcggcggc
acccatccaggctccggtcttccggtgatctacgagggtgcgcgcatctcggcccggctc
ctgatcgaggatctcgccaaggagaaggcccccgcgatcctggcggacctgccgacgacc
tcgccgcttgccacgcagggcgatccgagctga
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