Methylococcus geothermalis: GNH96_03355
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Entry
GNH96_03355 CDS
T06585
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
metu
Methylococcus geothermalis
Pathway
metu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GNH96_03355 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_03355 (nth)
Enzymes [BR:
metu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GNH96_03355 (nth)
DNA repair and recombination proteins [BR:
metu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GNH96_03355 (nth)
Prokaryotic type
GNH96_03355 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QJD29098
UniProt:
A0A858Q5H7
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All DBs
Position
complement(707248..707889)
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AA seq
213 aa
AA seq
DB search
MNANKRRRIFERLAAAIPAPTTELRYSTPFELLVAVVLSAQATDKGVNKATAKLFPVANT
PEAILALGEEGLREYIKTIGLFNSKAKNIIGLCKRLIERHGGEVPRDREALEALPGVGRK
TANVILNTAFGEHTIAVDTHIFRVANRTGLAPGKTVLAVEKALEKHTPREFLKDAHHLLI
LHGRYTCTARKPKCPQCPIADLCEYPDKTAPPD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaacaagcgaaggcggatcttcgaacgcctcgccgccgccatccctgcgccg
accaccgaactgcgctatagcacccccttcgaactgcttgtcgccgtcgtcctctccgcc
caagccaccgacaagggcgtcaacaaggccaccgcgaagctctttcccgtcgccaatacg
ccggaggccatccttgccctgggggaagaaggcttacgtgaatacatcaagaccatcggg
ctgttcaacagcaaggccaagaacatcatcggcctgtgcaagcgcctgatcgaacgccac
ggcggcgaagtgccgcgagaccgcgaagcgctggaagccctgcccggcgtgggccgcaag
accgccaacgtgattctcaacaccgccttcggcgagcacaccatcgcggtcgacacccac
atcttccgcgtcgccaaccgcaccggcctggcgccgggcaagacggtgcttgcagtggaa
aaagcgctggagaagcatacccctcgcgagttcctgaaggatgcccaccacctcctcatc
ttgcacggccgctatacctgcaccgcccgcaaacccaaatgcccgcaatgccccatcgcc
gacctgtgcgagtatccggacaagaccgcgccacccgactga
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