Methylobacterium sp. XJLW: A3862_02185 Help Entry A3862_02185       CDS       T05508                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism metx  Methylobacterium sp. XJLW Pathway metx03030   DNA replication metx03410   Base excision repair metx03420   Nucleotide excision repair metx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:metx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     A3862_02185    03410 Base excision repair     A3862_02185    03420 Nucleotide excision repair     A3862_02185    03430 Mismatch repair     A3862_02185  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:metx03032]     A3862_02185    03400 DNA repair and recombination proteins [BR:metx03400]     A3862_02185 Enzymes [BR:metx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      A3862_02185 DNA replication proteins [BR:metx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      A3862_02185 DNA repair and recombination proteins [BR:metx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      A3862_02185    NER (nucleotide excision repair)     GGR (global genome repair) factors      A3862_02185    MMR (mismatch excision repair)     DNA ligase      A3862_02185   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       A3862_02185 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT 5_3_exonuc BRCT_2 Motif Other DBs NCBI-ProteinID:  AWV14452 LinkDB All DBs Position 488219..490696 Genome browser AA seq 825 aa AA seqDB search MAVTKSDPLDLDLTAEDARAEYARLSDALLEADRLYYQEDAPEISDAEYDRLRRRLEEIE ARFPDLAGTGAASTSVGAKPSEKFAKVRHAVPMLSLGNAFDDGEVAEFVARVRRFLGWPD ETPLAFTAEPKIDGLSLSLRYVNGRLDTAATRGDGEVGENVTANARTVQDIPAVLAGSGW PEICEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFA YAWGELSAPIAETQSGSLQRFADWGLPVNPRTETFTDTEAMLAHYRRIEADRAGLGYDID GVVYKVDDLGLQKRLGFVSRSPRWALAHKFAAQEATTVMEDIVINVGRTGSLNPLAKLRP VTVGGVVVSNATLHNEGYVRGVGADGEFIREPIAEGIGADGQPILVPRDIRVGDTVTVVR AGDVIPKVMDVDLTKRPAGSQPYAFPETCPACGSRAVRAINPRTGRPDAVRRCTGGLICP AQGVERMKHFVSRNGFDIEGFGETYIEVLFEAGLVRQPADLFRLDFEELKAAIVARREAL SAERRADSATAEPPKKAAKKKGEDDDKAIKNLLAAVEARRAVPMNRLLFALGIPQIGEAT AKALAKRFTDMPTLIAAIQEASAAQPGPDWVELTAVPRVGGTTRDRLLDLGFPEDDAAPA KERARLSAVQRENLLAHYGDVDAVRAAIARAAAQRPGDAYRVFADDGEIGPVATDALLLF FSEPHNADAVAALLDAVAVEPMERPASASAFAGKTVVFTGSLEKMTRNEAKAVAERLGAK VSGSVSAKTDLVVAGPGAGSKLKDAQKHGVQVVSEDDWLAMVAQG NT seq 2478 nt NT seq  +upstreamnt  +downstreamnt atggccgttacgaaatccgatccgctcgatctcgacctcaccgccgaggatgcgcgcgcc gagtacgcgcggctgtcggacgcgctcctggaggccgaccggctgtactaccaggaggac gcgcccgagatctcggacgccgagtacgaccggctgcgccgccgcctcgaggagatcgag gcgcgctttccggatctcgccggcaccggcgcggccagcacgtcggtcggcgcaaagccc tcggaaaagttcgccaaggtgcggcacgccgtacccatgctctcgctgggaaatgccttc gacgatggggaggtggccgagttcgtcgcgcgcgtgcgccgcttcctgggctggcccgac gagacacccctcgccttcacggccgagcccaagatcgacggcctgtccctgtcgctgcgc tacgtgaacgggcggctcgacaccgcggccacccgcggcgacggcgaggtcggggagaat gtcacggccaatgcccgcacggtgcaggacatcccggcggtgctcgcggggtccggctgg ccggagatctgcgaggtgcgcggggaggtctacctgtcccacgccgatttcgccgccatc aacgcccggcaggaagcggccggcaagccgctcttcgccaatccgcgcaacgccgcggcc gggagcctgcgccagctcgatcccgcgatcaccgcgtcccgtccgctccggttcttcgcc tatgcctggggcgagctgtcggcgcccatcgcggagacgcaatccggcagcctccagcgc ttcgcggactggggcttgccggtgaatccccgcaccgagaccttcacggacacggaggcg atgctcgcccattaccgccgcatcgaggcggaccgggccgggctcggctacgacatcgac ggcgtcgtctacaaggtcgacgacctcggcttgcagaagcgtctcggcttcgtctcgcgc tcgccgcgctgggccctcgcccacaaattcgccgcgcaggaagccacgacggtaatggag gacatcgtcatcaatgtcggccgcaccggctccctgaacccgctggcgaagctgcgcccc gtgacggtcggcggcgtcgtcgtctccaacgccaccctccacaacgagggctatgtgagg ggcgtcggggcggacggcgaatttatccgtgagcctatcgcggagggaatcggcgccgac ggtcagccgatcctcgtgccccgcgacatccgcgtcggcgacaccgtgacggtggtgcgg gccggggacgtgatccccaaggtcatggatgtcgacctcaccaagcgtccggccgggtcg cagccctatgcgtttcccgagacctgtccggcctgcggcagccgcgccgtccgcgccatc aatccgcgcaccggccgccccgacgcggtgcgccgctgcaccggcggcctgatctgcccg gcgcagggcgtcgagcgcatgaagcacttcgtgtcgcgcaacggcttcgacatcgagggg ttcggcgagacctatatcgaggtcctgttcgaggccgggctcgtgcgccagcccgccgac ctgttccgcctcgatttcgaggaactcaaggccgccatcgtggcgcgacgggaggcgctc tcggccgagcggcgcgcggactcggcaacggccgagccacccaagaaagccgccaagaag aagggcgaggacgacgacaaggcgatcaagaacctgctcgccgccgtcgaggcacgacgg gccgtgccgatgaatcgcctgctcttcgccctcggcattccgcagatcggcgaggcgacc gccaaggcgctggccaagcgtttcaccgacatgccgacgctcatcgcggcgatccaggag gcctcggcggcgcagcccggaccggattgggtcgaactcaccgccgtcccgcgcgtcgga ggcaccacccgcgaccggctgctcgatcttggcttcccggaggacgacgccgcgccggcc aaggagcgggcgcgcctgagcgcggtccagcgcgagaacctccttgcccattacggcgac gtcgacgcggtgcgtgcggcgatcgcgcgcgcggcggcgcagcgtcccggggatgcctac cgggtcttcgccgatgacggggagatcggcccggtagcgaccgatgccctgctcctgttc ttctccgagccgcacaacgccgatgccgtcgcggctctgctcgacgcggtcgcggtcgag ccgatggagcggcccgcctcggcctccgccttcgcggggaagaccgtggtcttcaccggc agcctggagaagatgacccgcaacgaggccaaggcggtggccgagcgcctcggcgccaag gtgtccggctcggtctcggccaagaccgacctcgtcgtggccggcccgggagccggctcg aagctgaaggacgcccagaagcacggcgtccaggtcgtgtcggaggacgattggctggcg atggtggcgcagggttga

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