Phytobacter sp. MRY16-398: MRY16398_38750
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Entry
MRY16398_38750 CDS
T05735
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mety03009
]
MRY16398_38750 (rlmC)
Enzymes [BR:
mety01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
MRY16398_38750 (rlmC)
Ribosome biogenesis [BR:
mety03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MRY16398_38750 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_11
Methyltransf_ANTKMT
Cons_hypoth95
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BBE78819
LinkDB
All DBs
Position
complement(4003973..4005109)
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AA seq
378 aa
AA seq
DB search
MQCALFDARRCHSCQWIEQPTGDQLCAKMTDLRTLLADLPVTEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLTDCPLYPASFQAVFAVLKPFIARAGLTPYNVARKRG
ELKYLLLTESQHTGGMMLRFVLRSQAKLEQLRAALPWLQAQLPQLRVISVNIQPVHMAIM
EGETEIFLTEQQALAENFNGVPLWIRPQSFFQTNPVVASALYATAREWVRALPVRHMWDL
FCGVGGFGLHCATPGMTLTGIEIAPEAIACAKQSAAELGLTDLHFQALDSTRFATAQTDA
PQLVLVNPPRRGIGQALCDYLSRMAPPYIVYSSCNARTMAADLHALEGYRVERVQLFDMF
PHTAHYEVLTLLVKCSTV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctttgacgccaggcgctgtcactcctgtcagtggattgaacaaccg
actggcgaccaactctgtgcaaaaatgaccgatctccgcaccttgctggcggatttgccg
gtgacagaatggtgcgcgccggttagcggcccggaacaggggtttcgtaataaagccaag
atggtggtgagcggcagcgtggagaaaccgctgctcggcatgttgcatcgcgacggtacc
cccgaagatttgaccgattgcccgctttatcccgcctcgtttcaggcggttttcgccgtc
cttaaaccttttatcgcccgtgcgggcttaacgccctacaacgtggcgcgtaaacgcggt
gagctgaaatacctgctattaaccgaaagccagcatacgggcggcatgatgctgcgtttt
gtgctgcgttcacaggccaagcttgagcagcttcgtgccgcgctgccgtggttacaggcg
caattgccgcagcttcgcgtcatttcagtcaatatccagccggtgcacatggccattatg
gaaggggagacggaaatcttcctgactgagcagcaggcgctggcggaaaatttcaacggc
gtgccgttgtggatccgcccgcagagtttctttcaaaccaatccggttgtcgccagtgcg
ctgtacgctacggcgcgtgagtgggtaagggcgctgccggtacgccatatgtgggatctg
ttttgcggtgtcggcggttttggtctgcattgtgcaaccccggggatgacgctcaccggt
atcgaaatcgccccggaggcgattgcctgcgcgaagcagtctgcggctgagctggggctg
accgatttgcactttcaggcgctggactccacccggttcgcgaccgcccagacggatgcg
ccacaactggtgctggtaaacccgccgcgtcgtggaattggccaggcgctttgcgattat
ctgagtcggatggcgccgccgtatatcgtctattcaagctgtaatgcccgcacgatggcg
gcagacttacacgcgctggagggctatcgcgtggagcgtgtacaactgtttgatatgttc
ccccacacggcgcattacgaagtgctgacactgctggtgaaatgttctacggtttaa
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