KEGG   Methylorubrum extorquens PA1: Mext_3625
Entry
Mext_3625         CDS       T00640                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
mex  Methylorubrum extorquens PA1
Pathway
mex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mext_3625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mex03400]
    Mext_3625
Enzymes [BR:mex01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mext_3625
DNA repair and recombination proteins [BR:mex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Mext_3625
 Prokaryotic type
     Mext_3625
SSDB
Motif
Pfam: HhH-GPD Ogg-HhH HHH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: ABY32003
LinkDB
Position
4004971..4005687
AA seq 238 aa
MPATPSRSQNTSRRAAAPVAAKRDLDAIYGILSKTYTTFDETDDPWMTNGLSSTPFKSLV
SVCLSTMTITKRVVNAAVPLYEKVSTFEELRDLPDDELRRIIKPVAHYNRKTKNLKEMAR
QIIEDYDGNIPDNRDDLIKLQGVGRKCVDILMNFTFSQDSIAVDRHVLRVMNRLGVVETT
SAKQAADLINAQTPARHKRHAHEWLIQHGMKICVARTPKCADCPLTKHCDWYADHRTA
NT seq 717 nt   +upstreamnt  +downstreamnt
atgccggcgaccccatcccgctcgcagaacacatcccgccgcgccgccgcaccggtggca
gctaagcgcgatctcgatgcgatctacggcatcctgagcaagacctacacgaccttcgat
gaaaccgacgatccgtggatgaccaacggcctgtcctcgacgccgttcaagagcctcgtg
tcggtgtgcctgtccacgatgacgatcaccaagcgcgtcgtgaacgcggccgtgccgctc
tatgaaaaggtttcgaccttcgaggagctgcgcgacctgccggacgacgaattgcgtcgc
atcatcaagccggtcgcgcattacaaccgcaagaccaagaacctgaaggaaatggcccgc
cagatcatcgaggactacgacggaaacatacccgacaaccgggacgacctgataaagctg
caaggggtcggccgtaaatgcgtcgatattctgatgaacttcaccttctcgcaggatagc
atcgcagtcgataggcatgtccttcgcgtcatgaaccgtctcggtgtcgtggaaactacc
tcggccaagcaagcggccgacctcatcaatgcgcaaacccccgcgcgccataagcgccat
gcgcatgaatggctcatccagcatgggatgaagatctgtgtcgcccgaactccgaaatgc
gcagactgcccgctgacgaagcattgcgactggtacgccgaccatcgcaccgcctag

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