Methylorubrum extorquens PA1: Mext_3917
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Entry
Mext_3917 CDS
T00640
Name
(GenBank) HpcH/HpaI aldolase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex00630
Glyoxylate and dicarboxylate metabolism
mex00660
C5-Branched dibasic acid metabolism
mex00680
Methane metabolism
mex00720
Other carbon fixation pathways
mex01100
Metabolic pathways
mex01120
Microbial metabolism in diverse environments
mex01200
Carbon metabolism
Module
mex_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Mext_3917
00660 C5-Branched dibasic acid metabolism
Mext_3917
09102 Energy metabolism
00720 Other carbon fixation pathways
Mext_3917
00680 Methane metabolism
Mext_3917
Enzymes [BR:
mex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
Mext_3917
4.1.3.25 (S)-citramalyl-CoA lyase
Mext_3917
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Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
ABY32288
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Position
4353138..4354187
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AA seq
349 aa
AA seq
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MKLPRRFFQPLAAGAPEPFRELPIKLERMIHFVPPHNEKVRARVPELAKTVDVVLGNLED
AVPADQKEAARKGFVEMARATDFAASGTGLWTRINALNSPWILDDLFTIVAEVGAKLDVV
MVPKVEGPWDIHYIDQLLAQLEARHGVTKPILVHAILETAEGVANVDAIASASPRMHGMS
LGPADLAASRGMKTTRVGGGHPDYRVLSDPKGDAERASAQQDLWHYTIAKMVDACMANGI
KAFYGPFGDFSDSAACEVQFRNAFLMGCAGAWTLHPSQVALAKTVFAPDPAEVNFASRIV
EAMPDGTGAVMIDGKMQDDATWKQAKVIVDLARLVAEKDPDLAKVYNLP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccgcgccgcttcttccagcccctcgccgcgggtgcgcccgagccgttccgc
gaactgccgatcaagctcgagcggatgatccacttcgtgccgccgcacaacgagaaggtc
cgcgcccgcgtgcccgaactcgccaagacggtcgatgtggtgctcggcaacctggaggac
gcggtccccgccgaccagaaggaggcggcgcgcaagggcttcgtcgagatggcccgcgcc
accgatttcgcagcctccggcaccggcctgtggacgcgcatcaatgccctgaactcgccc
tggatcctcgacgacctgttcaccatcgtcgccgaggtcggcgcgaagctcgacgtggtg
atggtgccgaaggtcgagggcccctgggacatccactacatcgaccagttgctggcccag
ctcgaggcgcgccacggcgtgaccaagccgatcctcgtccacgccatcctcgagaccgcc
gaaggcgtggccaacgtcgacgccatcgcctccgcctcgccgcgcatgcacggcatgagc
ctcgggccggccgatctcgcggcgtcccgcggcatgaagaccacccgcgtcggcggcggt
cacccggattaccgcgtcctgtccgatcccaagggcgatgccgagcgggcgtccgcccag
caggatctgtggcactacaccatcgccaagatggtcgatgcctgcatggccaacggcatc
aaggcgttctacggcccgttcggcgacttctccgattcggccgcctgcgaggtgcagttc
cgcaacgccttcctgatgggctgcgccggcgcctggaccctgcatccgagccaggtcgcc
ctggccaagaccgtgttcgcccccgatccggccgaggtgaacttcgcctcccgcatcgtc
gaggcgatgcccgacggcaccggcgcggtgatgatcgacggcaagatgcaggacgacgcc
acctggaagcaggccaaggtcatcgtcgatctcgcccggctcgtggccgagaaggatccg
gatctcgccaaggtctacaatctgccctga
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