Methylobacillus flagellatus: Mfla_1403
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Entry
Mfla_1403 CDS
T00342
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03030
DNA replication
mfa03410
Base excision repair
mfa03420
Nucleotide excision repair
mfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mfla_1403
03410 Base excision repair
Mfla_1403
03420 Nucleotide excision repair
Mfla_1403
03430 Mismatch repair
Mfla_1403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfa03032
]
Mfla_1403
03400 DNA repair and recombination proteins [BR:
mfa03400
]
Mfla_1403
Enzymes [BR:
mfa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mfla_1403
DNA replication proteins [BR:
mfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mfla_1403
DNA repair and recombination proteins [BR:
mfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mfla_1403
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mfla_1403
MMR (mismatch excision repair)
DNA ligase
Mfla_1403
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mfla_1403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
DUF4874
Ribosomal_L27A
Motif
Other DBs
NCBI-ProteinID:
ABE49671
UniProt:
Q1H1G6
LinkDB
All DBs
Position
1508605..1510686
Genome browser
AA seq
693 aa
AA seq
DB search
MTGMQHGLFSPPAPAGLAEKVEALRATIRRYDYEYYVLNAPSVPDSEYDRVFRELKALED
AHPELVTPDSPTQRVGGAAMAELMPVRHHVPMLSIETETDTTPQGAYNFDARVRKKLGLL
PEDGPIEYAAELKFDGLAMSLRYEHGLLVQAATRGDGEVGEDVTHNIRTMRQIPLQLHGE
APEVLEVRGEVYMSRPDFERYNARQREHGKPTLVNPRNGAAGSIRQLDPRLAAQRPLSFF
AYGLGETKGWQVPLTHAQVLDALKALGLPVCNERAVGMGAEALAAFHQAISAKRDQLPYD
IDGVVYKVNRLDLQRELGFRSREPNWAVAHKFPAQEEMTVLEHIDVQVGRTGAITPVARL
KPVFVGGVTVTNATLHNQDEIDRKDVRIGDTVVVRRAGDVIPEVVSVIKERRPAGSQPYI
LLDAIGGLCPVCGSHAVRLPEEAAVRCTGGLFCAAQRKQAILHFASRRAMDIEGLGEKLV
DQLVDQNMVETLADLYDPGKINLETLSGLDRMAMKSAQNLLDALQKSKQATLNRFIYALG
IRNVGEATAKDLARHFGRLDALQAADVDTLQQVPDVGPVVARSIAEFFAEEHNREVIRKL
RDAGIHWSETDGQPASSSKLEGKTFVLTGTLPTMSRDEAKEKIEAAGGKVSGSVSKKTSY
VVAGSDAGSKLAKAQELGLAILDEEGLLSLLAE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtatgcaacacggcttgttttcgccgccagcgcctgccggcctggctgaaaag
gtggaagcattgcgcgccacgataaggcgctacgactacgagtattatgtattgaatgcg
cccagtgtgccggacagcgaatatgaccgggtattccgcgagctcaaggcgctggaagat
gcgcatccggagctggtgacgccggactctcccacgcagcgggtcggcggtgcagccatg
gcggagctcatgccggtgaggcatcacgtgcccatgctgtcgatcgagacggaaactgat
accacgccccagggtgcctataacttcgatgcacgcgtacgcaagaagctgggactgctg
ccggaagatgggccgattgaatatgcagcggagttgaaatttgacggcctggcgatgagt
ctgcgttatgaacatggcctgctggtgcaggcggcaacccgtggcgacggcgaggtcggc
gaagacgtgacacataatatccgcaccatgcgccagattccgctgcaattgcacggcgaa
gcgccggaagtgcttgaggtccggggtgaggtgtacatgagtcgcccagatttcgagcgt
tacaatgcacgccaacgtgaacacggcaagccgaccttggtcaatccgcgcaacggcgcg
gcaggcagcatccgtcagctcgacccgcggcttgccgcccagcgccctttgtcattcttt
gcctatggtcttggagagaccaaggggtggcaggtacctctcacgcacgcccaggtgctg
gatgcgctcaaggccttgggtctacctgtgtgcaacgaacgtgccgtcggtatgggcgca
gaggcactggcggccttccatcaggccatttccgccaagcgggaccagttgccttacgat
atcgatggcgtagtctacaaggtcaatcgcctggacttgcagcgcgagcttggttttcgt
tcccgtgaaccgaattgggccgtggcccacaagttcccggcgcaggaagaaatgacggtg
ctggagcatatcgatgtccaagtggggcgcaccggcgccatcacccccgtggcgcgcctg
aagccggtattcgtgggaggtgtgactgtcaccaacgccacgctacacaaccaggatgag
atcgaccgcaaggacgtgcgcatcggcgataccgtggtggtgcgccgcgccggcgacgtc
atccccgaggtcgtgtccgtgatcaaggaaaggcgtcctgctggctcccagccctacatt
ctgcttgatgcgataggcggcttatgcccggtatgcggctctcatgccgtccggctgcct
gaagaggccgctgtgcgctgcacaggcggcttgttctgcgcggcacagcgcaagcaggcc
atcctgcatttcgcttcccgccgtgccatggatatcgaaggcctgggagaaaagctggtc
gaccagctggtcgaccaaaacatggtggaaaccctggcggatctatatgacccggggaaa
atcaatctggaaacgctatccgggctggatcgcatggccatgaaatctgcccagaacctg
ctggatgcgttgcagaaaagcaagcaggcgacgctgaacaggttcatttacgcactgggc
atacgcaacgtgggagaagcgacggcaaaggacctggcgcgtcatttcggcaggctggat
gcgctgcaagcagcagatgtcgacactttgcagcaggtgccggacgtcgggcctgttgtt
gcacgctcaatcgcggagttttttgccgaggagcataaccgtgaagtgattaggaagctg
cgcgatgccggcatccactggagcgagactgatggccagccagccagttccagcaagctg
gagggaaagacctttgtattgactggtacgctgccaactatgtccagggatgaggccaag
gaaaagatagaggcggctggaggcaaggttagtggcagcgtttccaagaaaaccagctat
gtcgtggcgggcagcgatgccggcagcaagcttgccaaggcgcaggagctggggctggcg
atactggacgaggaggggctgttgagcctgctcgctgaatga
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