Myxococcus faecalis: VZP55_21525
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Entry
VZP55_21525 CDS
T11143
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mfae Myxococcus faecalis
Pathway
mfae00300
Lysine biosynthesis
mfae00550
Peptidoglycan biosynthesis
mfae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VZP55_21525
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VZP55_21525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mfae01011
]
VZP55_21525
Enzymes [BR:
mfae01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VZP55_21525
Peptidoglycan biosynthesis and degradation proteins [BR:
mfae01011
]
Precursor biosynthesis
Amino acid ligase
VZP55_21525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBM_15
Phage_Orf51
Corona_6B_7B
Motif
Other DBs
NCBI-ProteinID:
XSF08364
LinkDB
All DBs
Position
5224294..5225817
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AA seq
507 aa
AA seq
DB search
MKLTDVLAGCGAEQTSGGRSAVDVTGVTQDSRHVKPGDLFVAIPGTKEDGAQFIGEAVSR
GAVAVVSEKPVPSSQVPFFKVGSARKALALIAANFHGRPADKLTLLAVTGTNGKTTTSFL
LEAMSAAAYVSTGVIGTLGYKFGGKTVPTANTTPDPLELHRIFKEMVDAGVETVVMEVSS
HALAQERVHGLTFKAAGFSNLSRDHLDYHKDMEDYFQSKRKLFAENLSASGVAVVNGDDT
YASRIYNEQRGQKKMAWKFSRQGSGEISASDVTFSLDGIKGTLKTPSGDIALKSKLLGPH
NLENILLAVGIGIGAGFSRSDVKVGIERMTPVEGRMERVENYGPGGAPAVLVDYAHTDDA
LKRALEAARSLAKGRVIVVFGCGGDRDKGKRPLMGQVAAEAADVAVITSDNPRTEDPDDI
IAQVTPGLEKAGLRRISAAKVKSGEKGYLVEADRRAAIEQAISLATGEDVVLIAGKGHET
YQQVGQEKHKFDDRQVAATVLAARKPS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggatgtcctcgcagggtgtggtgccgagcagacctcgggtggtcgttcc
gcggtcgacgtcaccggtgtgacccaggactcgcggcatgtgaagcccggcgacttgttc
gtcgccattcccggcaccaaggaggatggtgcccagttcatcggggaggccgtgtcacgc
ggagccgtggcggtggtctccgagaagccggtgccctcctcgcaggtgcccttcttcaag
gtgggcagcgcgcgcaaggcgctggccctcatcgcggcgaacttccatggccgtccggcc
gacaagctgacgttgctcgccgtcaccggcaccaacgggaagacgacgacgtccttcctg
ctggaggcgatgagcgcggcggcctacgtgtccacgggtgtcatcggcacgctgggctac
aagttcggcggcaagacggtgccgacggcgaacacgacgccggacccgctggagctgcac
cgcatcttcaaggagatggtggacgcgggcgtggagacggtggtgatggaggtctccagc
cacgcgctcgcgcaggagcgcgtgcacgggctgaccttcaaggccgcgggcttcagcaac
ctgagccgcgaccacctcgactaccacaaggacatggaggactacttccagtccaagcgg
aagctcttcgcggagaacctgtccgcctcgggcgtcgcggtggtgaacggcgacgacacc
tacgccagccgcatctacaacgagcagcgcggccagaagaagatggcgtggaagttcagc
cgtcagggcagcggtgagatttcggcctcggacgtcaccttctcgctggatggcatcaag
ggcacgctgaagacaccctcgggtgacatcgcgctcaagagcaagctgttgggcccccac
aacctggagaacatcctcctggcggtgggcatcggcatcggcgcgggcttctcgcgcagc
gacgtgaaggtcggcatcgagcggatgacgccggtggaaggccgcatggagcgcgtggag
aactacggcccgggcggagcgcccgcggtgctggtggactacgcgcacacggacgacgcg
ctcaagcgcgcgctcgaggcggcgcgctccttggccaagggccgcgtcatcgtggtcttc
ggctgcggtggggaccgggacaagggcaagcgcccgctgatggggcaggtggccgcggag
gccgccgacgtcgccgtcatcaccagcgacaacccgcgcacggaggacccggacgacatc
atcgcccaggtgacgccgggcctggagaaggcggggctgcgccgcatctccgccgccaag
gtgaagtccggtgagaagggctacctggtggaagcggaccgccgcgccgccatcgagcag
gccatcagcctggcgaccggggaggacgtggtgctcatcgccggcaagggccatgagacc
taccagcaggtgggccaggagaagcacaagttcgacgaccggcaggtggccgccacggtg
ctggccgcccgcaaacccagctga
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