Methanocaldococcus fervens: Mefer_0048
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Entry
Mefer_0048 CDS
T00976
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
mfe
Methanocaldococcus fervens
Pathway
mfe00300
Lysine biosynthesis
mfe00680
Methane metabolism
mfe01100
Metabolic pathways
mfe01110
Biosynthesis of secondary metabolites
mfe01120
Microbial metabolism in diverse environments
mfe01210
2-Oxocarboxylic acid metabolism
mfe01230
Biosynthesis of amino acids
mfe01240
Biosynthesis of cofactors
Module
mfe_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Mefer_0048
09105 Amino acid metabolism
00300 Lysine biosynthesis
Mefer_0048
Enzymes [BR:
mfe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
Mefer_0048
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Aconitase_2_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
ACV23890
UniProt:
C7P5Q8
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All DBs
Position
complement(48089..48580)
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AA seq
163 aa
AA seq
DB search
MVIKGRVHKFGDDVDTDAIIPGPYLRTTDPYELASHCMAGIDEDFPKKVKEGDVIVAGEN
FGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINVGLIPIIANTDEIEDGDVVEIDL
DKEEIKIIDKDKTIKCEAPKGLEREILNAGGLVNYLKRKTKIN
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggttatcaaaggaagagtccacaaatttggagatgacgttgataccgatgcgataatt
ccggggccatatttgagaaccacagatccctatgagttagcttcccactgtatggcagga
attgatgaagattttccaaaaaaagttaaagaaggagatgttattgtcgctggagaaaac
tttggatgtggctcaagtagagagcaggctgtgatagcaataaaatactgtggaattaag
gcggttatagccaaaagctttgcaagaatattttacagaaatgccatcaacgttggatta
atcccaataatagctaataccgatgaaattgaagatggagatgttgttgagattgatttg
gataaagaagaaattaaaataattgataaagataaaacaataaagtgtgaagctccaaaa
ggtctggaaagagaaattttaaatgctggaggtttagtcaattatttgaagagaaaaact
aaaattaattaa
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