Mycoplasmopsis felis: JPM2_0670
Help
Entry
JPM2_0670 CDS
T07088
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mfel
Mycoplasmopsis felis
Pathway
mfel03030
DNA replication
mfel03410
Base excision repair
mfel03420
Nucleotide excision repair
mfel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JPM2_0670 (ligA)
03410 Base excision repair
JPM2_0670 (ligA)
03420 Nucleotide excision repair
JPM2_0670 (ligA)
03430 Mismatch repair
JPM2_0670 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfel03032
]
JPM2_0670 (ligA)
03400 DNA repair and recombination proteins [BR:
mfel03400
]
JPM2_0670 (ligA)
Enzymes [BR:
mfel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
JPM2_0670 (ligA)
DNA replication proteins [BR:
mfel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JPM2_0670 (ligA)
DNA repair and recombination proteins [BR:
mfel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
JPM2_0670 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JPM2_0670 (ligA)
MMR (mismatch excision repair)
DNA ligase
JPM2_0670 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JPM2_0670 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
BRCT_2
Nlig-Ia
DNA_ligase_ZBD
DNA_ligase_A_M
HHH_5
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
BBU47374
UniProt:
A0A809S8H8
LinkDB
All DBs
Position
80713..82728
Genome browser
AA seq
671 aa
AA seq
DB search
MSDSKNIKNKIKELVDRLNVWDWEYYMLNEPSVSDEVYDNFYRELEVLEQQFPDLIMSNS
PTQNIGQWNNNKFAKFKHKKPMLSLNKAFSKEDLFKFLNETKENLKINNLSFSLEPKIDG
LSISLHYQNGRLIKAITRGNGVQGDDVTKNVFQISELPKEIPFLKDIEIRGEVYLSKSQF
EKINKQLLKNNQKTFSNPRNAASGTLKLLNPETVKERGLSILLYDIVNASELGFVSQEEL
LNTLKSWNIPTNSYIKNISDFNQIWDYVIAFKELKNSFDYDCDGFVIKVNNLKYWDELGQ
TSKFPKYAIAFKYETEEKVGLIKKITATVGRTGKITYLAHFNESLELNQTMVSNATLHNY
EFIKEMKINEGDEVLVIKSGEIIPKVIGLVKKNTDSIFRKLENCPSCSFELLTKEGFVDQ
FCVNENCHEKRIRSLIHFCSNQAMNIETLGSEIIRTFYEKGFLTDILSIYRLSDYKENIV
QLNSFGSSIKNKNTDFKKYNNIINSINKSKKTTVDTLLFAIGIPNIGKNVAKLISQKMNK
ISDLLTLDLDTLLEINTIGNIIISSIKNFISIPENINLIKKLDEIIEYQESQEKVSNTLE
NLTFVITGTLSESRDYFKNIIEQNGGKVTNTISKNTNYLLVGENPGSKIEKANKLNIKII
NESEFNSLILK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcaaagaatataaaaaataaaattaaagaactagtagatagattaaatgtg
tgagattgagaatattatatgctaaatgaaccaagtgtttcagatgaagtgtatgataat
ttttatagagaattagaagttctagaacaacagtttcctgatttaattatgtctaattct
cctacacaaaatataggacaatgaaataataataaatttgcaaaatttaaacataaaaaa
cctatgctatctttaaataaagcattttctaaggaagatttatttaaatttttaaatgag
acaaaagagaatttaaaaatcaataatctctcttttagtttagaacctaaaatcgatggt
ttatcgatttcattacattatcaaaacggaagattaatcaaagcaattactagaggtaac
ggtgttcaaggagatgatgtaactaaaaatgttttccaaatatcagaactaccgaaagaa
attccatttttaaaagatattgaaattcgtggtgaagtttatttatcaaaatcacaattt
gaaaaaataaataagcaattattaaaaaacaatcaaaaaactttttcaaatccaagaaat
gctgcttctggaacacttaaattattaaatccagaaacagttaaagaaagaggtctctca
attcttttgtatgatattgttaatgcttctgaattaggttttgtatctcaagaagaatta
ttgaatacattaaaatcttgaaatattcctactaatagttatataaaaaacatatctgat
tttaatcagatatgagattatgtaattgcatttaaagaattaaaaaattcttttgattat
gattgtgatggttttgtaatcaaagttaacaatttaaaatactgagatgaattaggtcaa
acgtccaaatttccaaaatatgccatagcttttaaatatgaaacagaagaaaaagtggga
ttaataaaaaaaataaccgcaacagtaggaagaaccggtaaaataacttatttagcccat
tttaacgaaagtttagaattaaatcagacaatggtttctaatgcaacacttcataattat
gaattcatcaaagaaatgaaaataaatgaaggtgatgaagttttagttattaagtcaggt
gaaataattccaaaagtaattggtttagttaaaaagaatacagattcaatttttcgaaaa
ctagaaaattgtccatcttgttcttttgaattattaaccaaagaaggttttgttgatcaa
ttttgtgtcaatgaaaattgtcatgaaaaaagaattagatctttaattcatttttgttct
aaccaagcaatgaatattgaaacacttggcagtgaaattattagaacattttatgaaaaa
ggttttttaactgatattctttctatttatagactatctgattataaagaaaacatagtt
caactaaatagttttggtagttctataaaaaataaaaatacagattttaaaaaatataac
aatataattaattctattaataagtctaaaaaaacaactgttgatacattattatttgct
ataggaatacctaatattggaaaaaatgtagcaaaacttatatctcaaaaaatgaataaa
atttctgatttattaacattagatttagatacattattagaaattaatacaataggaaat
attattatttcaagtattaaaaattttataagtattcctgaaaacattaatttaattaaa
aaattagatgaaattatagaatatcaagaaagtcaagagaaagtttcaaatactttagaa
aacttaacatttgttattactggtacattatctgaaagtagagattattttaaaaatata
attgaacaaaatggtggaaaagtaacaaataccatttcaaaaaataccaattatttatta
gttggtgaaaacccaggttctaaaatagaaaaagcaaataaattaaatatcaaaataata
aatgaatcagaatttaattctttgattttaaaataa
DBGET
integrated database retrieval system
