Micromonospora robiginosa: H1D33_05500
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Entry
H1D33_05500 CDS
T09299
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1D33_05500 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_05500 (nth)
Enzymes [BR:
mfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H1D33_05500 (nth)
DNA repair and recombination proteins [BR:
mfeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H1D33_05500 (nth)
Prokaryotic type
H1D33_05500 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QLQ38329
UniProt:
A0A7L6B935
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All DBs
Position
5727669..5728448
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AA seq
259 aa
AA seq
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MTTRSPETDLGRTRRARRIGRVLTETHPDAHCELDHSNALELAVATILSAQCTDKKVNEV
TPKLFARYRSAADYAGAERGEMEELIRPTGFYRNKTSSLINLGRALCERHDGEVPGKLAD
LVTLPGIGRKTANVILGNAFDVPGITVDTHFQRLVQRWQLTAETDPVKIEHAIGALYPKR
DWTMLSHRIIFHGRRVCHARKPACGACTLAKLCPAYGTGPTEPAAAAKLLKGPRARNLAA
AVGLDPDLVPQQATVADVP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacgcgctcccccgagaccgacctcggccgtacgcgtcgggcccgccgcatcggg
cgggtgctgaccgagacccaccccgacgcgcactgtgaactcgaccactccaacgcgctg
gagctggcggtcgccacgatcctgtccgcccagtgcaccgacaagaaggtcaacgaggtc
acgccgaagctcttcgcccgctaccgcagcgccgccgactacgccggggcggagcgcggc
gagatggaggagctgatccggcccaccgggttctaccgcaacaagaccagctcgctgatc
aacctgggccgggcgctctgcgagcgccacgacggcgaggtgcccggcaagctggccgac
ctggtcaccctgcccgggatcgggcgcaagaccgcgaacgtcatcctcggcaacgcgttc
gacgtgccgggcatcacggtcgacacccacttccagcggctggtgcagcgctggcagctc
accgccgagaccgacccggtcaagatcgagcacgcgatcggcgcgctctacccgaagcgc
gactggacgatgctgtcgcaccggatcatcttccacggccgccgggtctgccacgcccgc
aagccggcctgcggcgcgtgcacgctggcgaagctctgccccgcctacggcaccgggccg
accgagccggccgcggcggcgaagctgctgaagggcccccgcgcacggaacctcgcggcg
gccgtcggcctcgaccccgacctggtgccgcagcaggcgaccgtggcggacgtgccgtga
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