Candidatus Methylacidiphilum fumarolicum: MFUM_0696
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Entry
MFUM_0696 CDS
T09357
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Pathway
mfh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MFUM_0696 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfh03400
]
MFUM_0696 (nth)
Enzymes [BR:
mfh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MFUM_0696 (nth)
DNA repair and recombination proteins [BR:
mfh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MFUM_0696 (nth)
Prokaryotic type
MFUM_0696 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
RecR_HhH
DUF3349
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
CAI9085077
UniProt:
A0ABN8XHB2
LinkDB
All DBs
Position
MFUM:complement(701215..701892)
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AA seq
225 aa
AA seq
DB search
MPRKTNPSLNLEKFNESERIKKILSILRETYPNAKPALFFRNPLELLIATILSARCTDEQ
VNLVTAKLFQKYHTAADYAAAPIEELENAIHSLGFYKTKAKNIKNACQILASQCNGEVPS
QMEKLVNLPGVGRKTANVVLGNAFGINDGIVVDTHVSRVSFRLGLTQEKQPEKIEQDLMR
CIPKESWTEFSNLIIWHGRKRCKARNPDCPHCELNELCPKIGVKN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaaaaactaatccttctcttaacttagagaaattcaatgaatcagagcgaata
aaaaagattctatctatactgagagagacttatccaaatgcaaagcctgctctttttttc
cgaaatcctttagaacttctcattgcgacgattctttcagcgcgctgcactgatgaacaa
gtcaatctggtaaccgccaagctttttcaaaaataccatactgcagccgactacgcggcc
gcccctattgaagagctagaaaatgccattcatagtttgggattctacaaaacgaaagcc
aaaaatataaaaaacgcttgtcagattcttgcttcccaatgcaatggcgaggtaccttct
caaatggaaaaactagtcaacttgcccggtgtcggaaggaaaacggctaatgtggtttta
gggaacgcctttggaattaacgatggcatagttgtcgatacgcatgtaagccgggtgagt
tttcgattaggattgactcaagaaaaacaaccagaaaagattgaacaagatttaatgcgt
tgcattccaaaggaaagttggactgaattcagtaatctcataatctggcatggcagaaaa
agatgtaaagcaagaaatccagattgccctcattgtgaactaaacgagctttgtccaaaa
ataggggtaaaaaattaa
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