Marinobacter flavimaris: ACGK9W_21475
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Entry
ACGK9W_21475 CDS
T10818
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mfli Marinobacter flavimaris
Pathway
mfli00300
Lysine biosynthesis
mfli00550
Peptidoglycan biosynthesis
mfli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mfli00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACGK9W_21475
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACGK9W_21475
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mfli01011
]
ACGK9W_21475
Enzymes [BR:
mfli01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ACGK9W_21475
Peptidoglycan biosynthesis and degradation proteins [BR:
mfli01011
]
Precursor biosynthesis
Amino acid ligase
ACGK9W_21475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF2999
ADH_zinc_N
LpxK
Motif
Other DBs
NCBI-ProteinID:
XKQ61630
LinkDB
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Position
4601933..4603417
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AA seq
494 aa
AA seq
DB search
MCITSLSTLLQGIVAVPSVFDVTIHGLKTDSREVASGDAFIALSGARTPADFYVDKAIAA
GATVILLEAQQAGECTEHHGALIVPVAGLRSLVGRIADRFFEHPSQRLRLIGVTGTNGKT
SVCQYVAQLLKETGTPCGILGTLGYGMPGALQPATHTTPDAVQVNRVLSRIVKQEGRAAV
MEVSSHALDQGRVDNLSMTGAVFTNLTRDHLDYHGSMEAYGAAKAQLFQREELHFSVINF
DDPFGRQLFEQLDGKCDRVRYSLHEAQTELWLREFRPTDEGFEAEVDGEWGRFVVSVPLM
GSFNASNVLAAMATVLTLGVPIERVQQAVGRLTPPPGRLERFVGANGVRVVVDYAHTPDA
LANALTALRPHVTGELVCVFGCGGDRDAGKRPEMAREAERLADRVVVTDDNPRSEDPETI
ARHILAGFTDAARVSVIHDRAEAIQSTIRSATPNDVVLIAGKGHEAYQEIAGQKYPFSDA
EQVRHVLKLNGGVA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcacatctctcagcacgttattgcagggtatcgtagcggttccgtcggtgttc
gacgtgactatccacggactgaaaaccgacagtcgggaagtcgcctccggcgatgccttt
atcgccctctcgggcgcccgaacgccggctgacttctatgtcgataaggccattgcagcg
ggcgcaacggtcatcctcctggaagcgcagcaggcgggagagtgcaccgaacaccacggt
gccttgatcgtacctgtcgctggcctacgcagtctggtggggcgaatcgcagaccgcttt
ttcgagcatccgtcgcaacggcttcgcctgattggcgtgaccggaaccaatggcaagacg
tcggtctgccagtatgtcgcacagctgctcaaggaaacgggaacgccctgcggtatcctc
ggcaccctgggctatggcatgcccggcgccctgcaacccgcgacgcatacgacaccggat
gcggttcaggtaaaccgggtgctgtcccggatcgtgaaacaggaaggtcgggcagccgtg
atggaggtgtcttcccatgcccttgatcagggtcgcgtggataacctctcgatgaccggc
gctgtattcacgaatctgacccgggatcatctggattaccacggttccatggaagcctat
ggtgccgccaaggcgcagcttttccagcgcgaagagctgcatttttcggtaatcaacttt
gacgatccatttggtcgacagctcttcgaacagctggacggcaaatgcgatcgcgtgcgc
tacagcctgcacgaggcccagaccgagctctggttgcgggaattccgaccaaccgacgaa
ggctttgaagctgaggtcgatggcgagtggggccggtttgttgtctcggttccgctgatg
ggaagtttcaacgcgagcaatgtgttggcggctatggcaacggttctgacgcttggcgtg
ccgattgagcgcgtgcagcaggctgtcggtcggctcacaccgccaccgggcaggctggag
cgatttgtgggtgctaatggtgtcagggtggtggtcgattacgcccacaccccggatgcc
ctcgccaatgctctgacagcactgcgtccgcacgttaccggtgaactggtgtgcgtgttt
ggttgcggcggtgaccgtgatgccggtaaacgtccggaaatggcccgggaagccgagagg
cttgcagatcgggtggtcgttactgatgacaatccccgcagtgaggaccccgaaacaatt
gcacggcacatcctcgccggtttcacggacgctgcccgggtctctgttatccatgaccgg
gccgaggccattcagtcgacgatccgctcggccacgccaaacgacgtagttctgatcgca
gggaaaggccacgaggcttatcaggaaatcgccggccagaaatacccgttcagcgatgcg
gagcaggttcgccacgtcttgaaactcaatgggggtgtggcatga
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