Miscanthus floridulus: 136450070
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Entry
136450070 CDS
T10264
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00906
Carotenoid biosynthesis
mflo01100
Metabolic pathways
mflo01110
Biosynthesis of secondary metabolites
Module
mflo_M01040
Lutein biosynthesis, plants, lycopene => lutein
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
136450070
Enzymes [BR:
mflo01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
136450070
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Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
Thi4
FAD_binding_2
Pyr_redox_3
NAD_binding_8
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
136450070
NCBI-ProteinID:
XP_066306440
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Position
5:72682808..72688182
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AA seq
533 aa
AA seq
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MGLSGAMISAPLGCRGLPRGAVGGGKARKAEAERWRRAGWSRRVGGPKVRCVATEKHDEA
AAVGVEFADEEDYRKGGGGELLYVQMQATKPMESQSKIASKLLPIFDENTVLDLVIIGCG
PAGLSLASESAKKGLTVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWKDTIVYLDNN
KPILIGRSYGRVHRDLLHEELLRRCYEAGVTYLNSKVDKIIESPDGHRVVCCDKGREIIC
RLAIVASGAASGRLLEYEVGGPRVCVQTAYGVEVEVENNPYDPSLMVFMDYRDCFKEEFS
HTEQENPTFLYAMPMSSTRVFFEETCLASKDAMSFDLLKKRLMYRLNMMGVRILKVYEEE
WSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISNILRNRVPAE
YLLGNSQNYSPSMLAWRTLWPQERKRQRSFFLFGLALIIQLNNEGIQTFFEAFFRVPKWM
WRGFLGSTLSSVDLILFSFYMFAIAPNQLRMNLVRHLLSDPTGSTMIKTYLTL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctcgggcgctatgatctccgcgccgctcggctgccgtgggctgccgcgcggg
gcggtcggcggaggtaaggcgcggaaggcggaggcggagaggtggcggcgggcgggctgg
agccgacgcgtgggcggaccgaaggtgaggtgcgtggcgaccgagaagcacgacgaggcg
gcggcggtcggcgtggagttcgcggacgaggaggactaccgcaaggggggcggcggcgag
ctgctttacgtgcaaatgcaggccaccaagcccatggaaagccagtccaagatcgcttcc
aagctattgcccatatttgatgaaaatacagtacttgatttggttatcattggttgtggt
cctgctggtctttctctagcttcagagtcagctaagaaaggtctcaccgtaggtctcatt
ggtcctgaccttccattcacaaataactatggtgtgtgggaggatgagtttaaagatctt
ggtctagagagttgtatcgagcacgtctggaaggatactattgtctacctagacaataac
aagcccatactgattggccgttcttatggcagggtgcaccgtgacttgctccatgaggag
ctgctgagaagatgctatgaagctggcgtgacatacctgaactccaaagtggacaagatc
atagaatctccagatggacacagagtagtctgttgtgataagggtcgtgagataatttgc
aggcttgccattgttgcttcgggggcagcatctggtaggcttctagagtatgaggttggg
ggtccccgtgtttgcgtgcagactgcatacggagtcgaagttgaggtggaaaataatcca
tatgatcccagcttaatggttttcatggactacagagattgtttcaaagaggaattttca
cacactgaacaagaaaatcccactttcctgtatgctatgcccatgtcatccacacgagtt
ttctttgaggaaacatgcttagcttctaaagatgctatgtcatttgatctacttaagaag
aggctgatgtatcggttaaatatgatgggagttcgtatcctgaaagtttacgaggaggaa
tggtcctacattcctgttggagggtccttaccaaacacagatcagaaaaatcttgcattt
ggtgctgcagcaagtatggtgcatcctgcaacagggtactcagtggtcagatctttgtct
gaggctccaagatatgcttctgtgatatccaacatcttaagaaaccgagttcctgcagaa
tatttgcttggaaattctcaaaattacagtccatcaatgcttgcatggagaacactatgg
cctcaggaaaggaaacgtcaacgatccttcttccttttcggattggcgttgataattcaa
ctgaataatgaaggcatacaaacattctttgaagcctttttcagggtgccgaaatggatg
tggcgaggatttcttggctcaactctttcatcggtcgatctcatactattttcattctac
atgtttgccatagctccaaatcaattgcgaatgaacctcgtcagacatctcctctctgac
ccgactggctcaactatgatcaagacctacctgaccttataa
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