Miscanthus floridulus: 136467984
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Entry
136467984 CDS
T10264
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136467984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136467984
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
136467984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
nSTAND3
AAA
AAA_28
SMC_N
NACHT
AAA_15
AAA_23
AAA_5
AAA_25
AAA_18
AAA_24
AAA_22
AAA_30
SRP54
PduV-EutP
Zeta_toxin
AAA_33
AAA_16
Arf
FtsK_SpoIIIE
Rad17
AAA_14
Motif
Other DBs
NCBI-GeneID:
136467984
NCBI-ProteinID:
XP_066322931
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All DBs
Position
7:130646532..130652113
Genome browser
AA seq
295 aa
AA seq
DB search
MMAGEGNGDEGWRRSGIEVSALQFGYDGQPPLFARFNLRVAPGSRCLLVGANGSGKTTLL
KILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYLGGSWSRTIGSAGDVPLQGDFSAE
HMIFGVDGVDPVRREKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITV
DLDIVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDFAYIQEGELRRSGRYSDIE
ELKSAKNLLSVVESWLRSETKLPKKELPRPETQTRRSSPLDASPFRSSRHMAYYR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcgaagggaacggggacgaagggtggaggcgtagcggcatcgaggtcagc
gccctgcagttcggctatgacgggcagccgccgctcttcgcgcgcttcaacctccgcgtc
gcacccggctcccgctgcctcctcgtcggcgccaacggatcaggcaagaccacactcttg
aagattcttgcgggaaagcatatggttggaggaagagatgtggtgcgtgttctcaatggt
tccgcttttcatgatacacagctagtgtgcaatggcgacctttcgtacttggggggttct
tggagccgtactattggttcagctggtgatgttccgctgcaaggcgacttctctgctgag
cacatgatttttggagttgatggggttgatcctgttaggcgagaaaagctggttgatctg
ctagacattgatctgcaatggcgcatgcataaagtttcagatgggcagcgccgtagggtg
caaatctgcatgggtcttcttcatccatacaaggtgcttttgcttgatgaaatcaccgtt
gatctggacattgtgaccagaatggatctccttgatttcttcaaggaagagtgtgagcag
agggaagctaccatcgtatacgcgactcatatatttgatggactcgagacatgggctacc
gactttgcatacatccaagaaggcgagctgagaagatctggaagatactccgacatcgag
gagctaaagagcgccaagaacttgctgtcagtagttgagtcgtggctgagatcagagacc
aaactcccaaagaaggaacttccacgtcctgagacccagaccaggcgttcctcgccgttg
gacgcttctcctttccgttcatcacgccacatggcctactaccgttga
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