Miscanthus floridulus: 136477437
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Entry
136477437 CDS
T10264
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
136477437
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mflo01007
]
136477437
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136477437
Enzymes [BR:
mflo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
136477437
Amino acid related enzymes [BR:
mflo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
136477437
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
136477437
Prokaryotic type
Other AARSs
136477437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
HVO_A0114
Motif
Other DBs
NCBI-GeneID:
136477437
NCBI-ProteinID:
XP_066331695
LinkDB
All DBs
Position
8:complement(159945279..159963413)
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AA seq
1240 aa
AA seq
DB search
MLWSPGHRRIQGNGQMCSDGGAKSSGTTAALPFAAAAPSPETLAPFGATARIPAPVGATA
TVGVEAMDDVCEGKDFSFPQQEERVLELWAKLDAFHEQLRRTEGGEEFIFYDGPPFATGL
PHYGHILAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKALGITNRQQVFDLGI
GKYNETCRSIVTKYVSEWEAMVTRTGRWIDFKNDYKTMDINFMESVWWVFGQLWEKDLVY
KGFKVMPYSTGCKTALSNFEAALDYRAVPDPAVMVSFPIIGDADNAALVAWTTTPWTLPS
NLALCVNANLMYAKVKDKSNGAVYVIAESRLGQLPVKAKASGKKQAPSKGSNAEAVQDGL
DKESYELLAKIPGASLVGLKYTPLFDFFIELQETAFRVIADNYVTDDSGTGVVHCAPAFG
EDDHRVCLAAGIFETAGLVVAVDDDGCFIEKISDFKGRYVKEADKDIINAVKDKGRLISK
GSIEHSYPFCWRSGTPLIYRAVPSWFVKVEKIKDQLLECNKETYWVPDYVKEKRFHNWLE
GARDWAVSRSRFWGTPLPLWISQDGEEIVVMDSIEKLEKLSGVKVTDLHRHYVDDITIPS
KRGPEFGVLKRVDDVFDCWFESGSMPYAYIHYPFENRELFEKNFPGNFVAEGLDQTRGWF
YTLMVLSTALFGKPAFKNLICNGLVLAEDGKKMSKSKKNYPPPKDLIDEFGADSLRLYLV
NSPVVRAESLRFKRAGVFAVVKDVFLPWYNAYRFFVQNAKRLEVEGLASFSPMEQAVLLK
SSNVLDHWINSATESLVSFVHQEMDAYRLYTVVPYLVKYIDYLTNIYVRLNRKRFKGRTG
EEDCRISLSTLYHVLVTTCVVMAPFTPFFTEVLYQNLRKVSSKSEESIHFCKFPSTTGER
DERVEQSVNRMVTIIDLARNIRERHNKALKTPLKEMVVVHPDNDFLEDITGKLKEYVMEE
INVKTVTPCNDPLLYASLRAEPNFSVLGKRLGKDMGKVSNAVKKMTQEEILAFEKSGEIS
FFGHCLKLDDIKVIRQFKRPENVSEKEIDAAGDGDVLVILDLRADQSLFEAGVAREVVNR
IQKLRKTAQLEPADPVDVYYESVGNDKNTLEEILKSHDQYIRDALGSPIVPKEMAPKDVV
VLGEESHNVHDMLFVICIARSTPILSPDLLSHASGNSNHVEALRVYLLSRSLSRLKNQFQ
TGNGMITVTVDCIEGYPPISLQLGKHVFLSAGDFYLASRS
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgctctggagtcctggtcaccgtcggatacaagggaacggccagatgtgcagtgacggt
ggagcaaagtcatccggaacgactgcagccctacctttcgccgccgccgcaccatcgccc
gaaactctagcccccttcggcgccaccgctcgaatcccagcccccgtcggcgccaccgcg
accgtcggagtggaggccatggacgacgtgtgcgaggggaaggatttctccttcccgcag
caggaggagcgggtgctcgagctgtgggcgaagctcgacgccttccacgagcagctccgg
cgcacggagggcggtgaggagttcatcttctacgacggcccccccttcgccacgggcctg
ccccactacggccacatactcgccggcaccatcaaggacgtggtcacccggcaccagtcg
atgcggggccgccacgtctcgcgacgcttcgggtgggactgtcacggcctccctgtcgag
tttgagatcgacaaggcgctcggcatcaccaaccggcagcaggtgttcgacctcggcatc
ggcaagtacaacgagacgtgccgcagcatcgtcaccaagtacgtctccgagtgggaggcc
atggtcacacgcacggggaggtggattgacttcaagaacgactacaagaccatggacatc
aacttcatggagagcgtctggtgggtgtttgggcagctctgggagaaggacctcgtctat
aagggcttcaaggtcatgccttacagcacaggatgcaaaactgcactgtcaaactttgag
gcagcactggactatagggctgttcctgacccagcggtcatggtatccttccctattatt
ggtgatgcggacaatgcagctcttgttgcatggacgacaacaccctggacacttccaagt
aacctagcgctgtgtgtcaatgccaatctcatgtatgcaaaggttaaagacaaatcaaat
ggagcagtatatgttattgcagaatctaggcttgggcagttacccgttaaggccaaagct
tcaggaaagaagcaggcaccttcaaagggaagcaatgctgaagctgttcaggatggtttg
gacaaggaatcatatgagctgttggcaaagattcctggggcatccttggttggcttaaaa
tatactcctctatttgattttttcattgaacttcaagagactgccttcagagtgattgcg
gataactatgtcacggatgatagtggaacgggtgttgtccattgtgctcctgcttttggt
gaagatgaccatcgtgtttgccttgctgctggcatatttgagactgctggacttgttgtc
gctgttgatgatgacgggtgctttattgaaaaaatatctgattttaaagggcgatatgtc
aaagaagccgacaaggatatcatcaatgctgttaaggataaaggaagactcattagtaaa
gggagtattgagcactcttacccattttgttggcgatcgggtactcctcttatttatcgg
gctgttccaagctggtttgtcaaggttgagaagattaaggaccagttgctggaatgtaac
aaggagacttactgggtgcctgactatgttaaggaaaaaagatttcacaactggcttgaa
ggtgctcgcgattgggctgttagcagaagtagattctggggtactccacttccattgtgg
ataagtcaagatggtgaagaaattgttgttatggattctatcgagaagcttgaaaaatta
tctggagtcaaggtcacggatcttcaccgacactatgttgatgatattacaattccctct
aagagaggacccgagtttggggtgctcaaacgtgttgatgatgttttcgactgctggttc
gagagtgggtcaatgccatatgcctacattcactatccatttgagaatcgggaactattt
gaaaagaactttcctggcaattttgtggcagagggtttggatcaaactcgtggatggttc
tatactttgatggttctatcaacagcactgtttgggaagcctgcatttaagaatcttata
tgcaatggccttgtcttggctgaggatggtaagaaaatgagcaagagtaaaaagaactat
cctccacccaaagatctcattgacgagtttggagcggattctctgcgactatatttggta
aactctccagttgtacgtgcagagtctctacgattcaaacgtgctggtgtctttgctgtt
gtgaaagatgtcttcctcccatggtataacgcatacagattctttgtccaaaatgcaaag
agactggaagttgagggtcttgcctcattttctccgatggaacaagcggtacttctgaag
tcatccaatgtgttggatcactggataaactctgcaactgaaagtctagttagctttgtt
caccaggagatggatgcatatcggctttacacggttgtgccgtatttggtaaaatacatt
gactaccttactaacatatatgtgcgtttgaaccgcaaacgattcaaaggacgtactgga
gaagaagactgcagaatttctctttcaacactctaccatgttcttgtaacaacatgcgtg
gtgatggctccatttacaccattctttactgaagttctttatcaaaatttgcggaaggtg
tcaagtaaatctgaggagagcattcacttctgcaagttcccttccacaactggcgagaga
gatgagcgtgttgagcaaagtgtaaataggatggtgaccatcattgatcttgcacgtaat
attcgtgagcggcataacaaagctctcaaaacaccactcaaggagatggtggttgtgcat
ccagacaatgactttcttgaagacatcactggcaaactaaaagagtatgtcatggaggaa
atcaatgttaagactgtcactccatgtaatgatcccttgctgtacgcttctctgcgagcc
gagcctaatttcagcgtgctaggaaaaagacttggaaaagacatgggcaaagtatcaaat
gcggtgaagaagatgactcaggaagagatcttggcctttgaaaagagtggagagatttca
ttcttcggtcattgcttgaagctagatgatatcaaggtcatccgacaattcaagcgtcct
gaaaacgtgtcagagaaggagattgatgctgcaggagatggtgatgttttagtcatttta
gatctacgagctgaccagtcattgtttgaagctggagtggctcgagaggttgtgaacagg
attcagaaattacggaagactgctcagcttgaacctgctgatccagttgatgtgtattac
gaatctgtgggcaatgacaaaaacacactggaagagattttgaagtcacatgatcagtat
ataagagacgcacttggttcgccaattgttccaaaggaaatggcaccaaaagatgttgta
gtacttggtgaggagtcgcacaatgtacatgacatgttatttgtcatatgcattgcaagg
tccaccccaattctgtcaccagatcttctttctcatgcctcaggcaacagcaatcatgtg
gaggcgttgagagtgtatcttctgtcaaggtctctttccagattgaagaaccagttccaa
actggaaatggcatgattacggtcacggtcgactgcattgaaggttatccaccaatcagt
ttacagctagggaagcatgtttttctaagtgcaggggatttttatctggctagtcgatcc
taa
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