Miscanthus floridulus: 136477718
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Entry
136477718 CDS
T10264
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136477718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136477718
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136477718
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
136477718
NCBI-ProteinID:
XP_066332063
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Position
1:31792324..31794874
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AA seq
419 aa
AA seq
DB search
MDGNVRSAANQKKPIVADDDLIELLWHNGSVVAQPQAHHRPAPPSDRDRPGTIGLTGEET
AAWFPDTLDDALEKDLYTQLWYSTIADAAPQHEGTLLGPTSQPSPPLPPVGSSGVDSSWA
GDICSTFCGSNQVPRTPAGTSGKDAALQSEGPSGAGAHDGTSSSGGSGSNYGGSGLPSDS
VHVHKRKERCRDDSDSPSEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSERRRRDRIN
EKMRALQQLIPHCNKTDKASILDETLEYLKSLQMQVQIMWMTSGMAPMMFPGAHQFMPPM
ALGMNSGCIPAAQGLSQMPRLPYMSHPLPNHIPLNSSPAMNPMNPLNSANQMQNGHLREA
SNHFLHLDGRTAVVPQVPGPHVYGHQIAQAEEPNSILEVAASTVVPTSRAGQPPTFDGV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatgtgaggtcagcggcgaatcagaagaagcccatcgtcgcggacgacgac
ctcatcgagctgctgtggcacaacgggagcgtcgtcgcgcagccccaggcgcaccacagg
ccggcgccgccctccgaccgcgaccgcccgggcaccatcggcctcaccggcgaggagacc
gccgcgtggttcccggacaccctcgacgacgcgctcgagaaggacctgtacacgcagctc
tggtacagcaccatcgccgacgccgccccgcaacacgagggcacgctcctgggccctacc
tcgcagccttcgccgccgctgccgccggttgggagcagcggcgtcgactcgagctgggcc
ggcgacatctgctccaccttctgcggcagcaaccaggtgcccaggacgccggcagggacc
agcgggaaggacgcggcattgcagtcggaggggccgagcggcgccggcgcgcacgatggc
acatcgtcgtccggtgggtctggaagcaactatgggggatccgggctgcccagtgacagc
gtccatgtccacaagaggaaggagaggtgtagagacgactcagatagtccgagtgaggat
gccgagtgtgaggaggcaactgaggagaccaaaccgtcgcggcggcatgggccgaaacga
cggactcgtgcagctgaagtccataatctctcagagaggagaagaagggaccggatcaat
gaaaagatgcgtgcgttgcaacagctgatcccgcactgcaacaagactgacaaagcgtca
atattagacgagacgcttgagtatctcaagtccctccaaatgcaagttcagatcatgtgg
atgacttctgggatggcgccaatgatgtttcctggtgctcaccaattcatgccaccaatg
gctctaggcatgaattcaggttgcatccctgcagcacaaggcctaagtcagatgccaaga
ttaccatacatgagccaccccctgccaaatcatatccctctgaactcatctccagctatg
aatccaatgaatccactgaactctgcgaaccagatgcaaaacggtcacctcagggaggca
agtaatcacttccttcacctagatgggcgaacagcggtagtacctcaggtaccaggaccc
catgtttatggacatcaaatagcacaagccgaagaacccaatagtatactggaagtggct
gctagtactgttgtgccaacttctagggcagggcaaccacctacttttgatggagtttag
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