Miscanthus floridulus: 136477946
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Entry
136477946 CDS
T10264
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136477946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136477946
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136477946
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
136477946
NCBI-ProteinID:
XP_066332327
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Position
1:complement(33198371..33201321)
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AA seq
419 aa
AA seq
DB search
MDGNVRSAANQKKSIVADDDLIELLWHNGSVVAQPQAHHRPAPPSDRDRPGTSGLTGEET
AAWFPDTLDDALEKDLYTQLWYSTIADAAPQHEGTLLGPTSLPSPPLPPVGSSGVDSSWA
GDICSTFCGSNQVPRTPAGTSGKDAALQSEGPSGAGAHDGTSSSGGSGSNYGGSGLPNDS
VHVHKRKERCRDDSDSPSEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSERRRRDRIN
EKMRALQELIPHCNKTDKASILDETLEYLKSLQMQVQIMWMTSGMAPMMFPGAHQFMPPM
ALGMNSGCIPAAQGLSQMPRLPYMSHPLPNHIPLNSSPAMNPMNPLNSANQMQNGHLREA
SNHFLHLDGRTAVVPQVPGPHVYGHQIAQAEEPNSILEVAASTVVPTSRAGQPPTFDGV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatgtgaggtcggcggcgaatcagaagaagtccatcgtcgcggacgacgac
ctcatcgagctgctgtggcacaacgggagcgtcgtcgcgcagccccaggcgcaccacagg
ccggcgccgccctccgaccgcgaccgcccgggcaccagcggcctcaccggcgaggagacc
gccgcgtggttcccggacaccctcgacgacgcgctcgagaaggacctgtacacgcagctc
tggtacagcaccatcgccgacgccgccccgcaacacgagggcacgctcctgggccctacc
tcgctgccttcgccgccgctgccgccggttgggagcagcggcgtcgactcgagctgggcc
ggcgacatctgctccaccttctgcggcagcaaccaggtgcccaggacgccggcagggacc
agcgggaaggacgcggcattgcagtcggaggggccgagcggtgccggcgcgcacgatggc
acatcgtcgtccggtgggtctggaagcaactatgggggatccgggctgcccaatgatagc
gtccatgtccacaagaggaaggagaggtgtagagacgactcagatagtccgagtgaggat
gccgagtgtgaggaggcaactgaggagaccaaaccgtcgcggcggcatgggccgaaacga
cggactcgtgcagctgaagtccataatctctcagagaggagaagaagggaccggatcaat
gaaaagatgcgtgcgttgcaagagctgatcccgcactgcaacaagactgacaaagcgtca
atattagacgagacgcttgagtatctcaagtccctccaaatgcaagttcagatcatgtgg
atgacttctgggatggcgccaatgatgtttcctggtgctcaccaattcatgccaccaatg
gctctaggcatgaattcaggttgcatccctgcagcacaaggcctaagtcagatgccaaga
ttaccatacatgagccaccccctgccaaatcatatccctctgaactcatctccagctatg
aatccaatgaatccactgaattctgcgaaccagatgcaaaacggtcacctcagggaggca
agtaatcacttccttcacctagatgggcgaacagcggtggtacctcaggtaccaggaccc
catgtttatggacatcaaatagcacaagccgaagaacccaatagtatactggaagtggct
gctagtactgttgtgccaacttctagggcagggcaaccacctacttttgatggagtttag
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