Miscanthus floridulus: 136479048
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Entry
136479048 CDS
T10264
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo04016
MAPK signaling pathway - plant
Brite
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
136479048
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GFIT
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NCBI-GeneID:
136479048
NCBI-ProteinID:
XP_066333153
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Position
1:34708153..34717006
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AA seq
1022 aa
AA seq
DB search
MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLCRPNPNGLEFDNLYLDMNGII
HPCFHPEGRPAPATYDEVFKSIFDYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTQFMYVLSTALQYYIQ
LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVISMPGQQEKCFLCGQVGHLAAECRGPSQPDNSVELPPIHKKKYQF
LNIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAINLL
MSIYRSEFASMGGYLTDGGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHRI
HRENSEENQYVDKVKLGEPGYRERYYAEKFKEEAESKPIDQVRKPIDQVRRDVVQKYVEG
LCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLSELEITFFLGQPFKPFDQLMGTLPAAS
SNALPKYYGDLMADPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDEMRLLVETRKLE
DTLTEEEKFRNRTMFDIIYVRDTHPLTSQIMFLYQNYYHLSRTDPYVIPIQPAVRLVEML
DTLIWIIFHSAFVYCVAVCSGGMNGFLCLSERNWYNVTVTSPVRGFNGIAQNRVLNATYL
NPQYHKHIPEPPVGVIIPAKILKPSDFKPFPVLWHEDNSRRQARERPQVSGALSGSLLGE
AAHRLVKNSLQIKSGNAAGLLDMPYRGAPYGPGNRPRPAGPLGYERGFMDNPYHAHMSRS
VPNPHPQFFGDSQVNKQPMRILERPNSRSHDAGIRASMSKLTIQEGPRPHQNNRMQNSGY
WPNQPHPNHFAGPPAQRPMQNISFIPQRPFQTGGFPQQRPVNGVPPPLPPSNWIGKQPSG
SHMGVPAKHDPRTAPDRQPKQDNPRLQQDKRQQATTKVYRAKTQATNGNGLSESGKQEES
AA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttctaccggtggctggcggaccgctacccgctgacggtgtcggac
gcggaggaggaggagcccgtggagctcgagcccggcgccttcgtccccgttgacctatgc
cgccccaaccccaacggcctcgagttcgacaacctctacctcgacatgaatggcatcatc
cacccctgcttccaccccgagggtcggcctgcccccgccacctacgacgaggtgttcaag
tcgatttttgattacatcgaccacctcttcggcctcgtccgccccaggaagctcctctac
atggccattgacggtgttgctccaagggcaaagatgaatcagcagaggtccaggcgattc
cgggctgctaaggacgcggctgatgcggcagcggaggaggagaggctgaggaaggagttt
gaggcagagggtaggactctagcccagaaggagaagtcagaggcaatcgactccaatgtc
attactccagggacacagttcatgtatgtactatctacggcgcttcagtactacatacag
ttgaggctgaatcacacgcttggatggcagtctgtcaagataatattgtctgattccaat
gtccctggagagggagagcacaaaattatgtcatacatccgcctgcagcgcaatcttcct
ggctttgatcccaatacgcgccattgcttatatggcctggatgctgatttgattatgctt
gctctagcaactcacgaggtccacttctcaattttaagagaggtgatctccatgccaggg
caacaagaaaaatgttttctttgtggtcaagttgggcatttggctgctgaatgcagaggt
cctagtcagcctgataattctgtggagctacctcctattcataaaaagaagtaccagttt
cttaacatatgggtgttgcgtgaatacctggcaaaggatttggaaattgtagatgctccc
ttcaagataaactttgaacgtcttattgatgattttgtgtttatgtgtttctttgttggc
aatgactttcttcctcacatgccaactttggaaattcgtgagggtgccattaatcttctc
atgagtatctacaggtcggagttcgcatcaatgggtggttacctaactgacgggggtgag
gttatattggaccgagtggaacatttcatccagtctgttgcggtcaatgaagaacaaatt
ttccagaaacgagcacgcattcaacaggcacgcgagaacaatgaagagaagcatagaata
cacagagagaattctgaggagaatcaatatgtggataaggtgaagttaggagagccagga
tacagggagcgttattatgctgagaagtttaaagaagaggcggagtcaaaacccattgat
caagttcggaaacccattgatcaagttcggagagatgttgtccagaaatatgtggaaggt
ctttgttgggttatgagatactactatcaaggtgtttgttcatggcagtggttctatccc
tatcattatgcgccttttgcatctgatctaaaaggcttgtctgaattggaaataaccttt
ttcttgggtcaacctttcaagccatttgatcaactaatgggaacactaccagctgcaagc
tccaatgcactgccaaaatactatggggatttgatggctgatccagattcaccattgaag
tctttctatcccaaagattttgagatagacatgaatgggaaacgttttgcatggcagggt
gttgcaaaattgccttttattgatgaaatgcgtctgcttgtggagacaagaaaacttgaa
gatactttgacagaagaagagaaattcaggaacaggactatgtttgacataatttatgtt
agagatactcatccattgacctctcagattatgttcctgtatcagaactactaccaccta
tcaagaacagacccttatgttattcccattcagcctgctgttaggttggtagaaatgcta
gatacattgatttggattatttttcactcggcatttgtttactgtgttgctgtatgcagt
ggtggaatgaatggattcctatgtttatctgaaaggaactggtataatgtcactgtaact
tctccagttagggggttcaatggcattgctcagaacagagttttgaatgctacctatctt
aatcctcagtatcacaaacacatcccagagcctccagtgggggtcatcatacccgcgaag
atactgaaacctagtgatttcaaaccctttcctgtgttgtggcatgaagataatagtcgt
cgacaagcaagagaaaggcctcaggtttctggagccctttctggttctctcttaggagaa
gctgcacaccgtctggtgaaaaactccctccagatcaaatctggcaatgctgctgggtta
cttgatatgccatacaggggtgcaccctatggccctggaaacagaccaaggcctgctgga
ccattggggtatgagaggggttttatggataatccataccatgcacacatgtctagaagt
gttccaaaccctcaccctcagttctttggtgattctcaagttaacaaacagccaatgcgg
atactagaacggccaaactcacgaagtcatgatgctggtatccgtgcatcaatgtcaaaa
ttgacaatccaagaagggccaaggcctcatcaaaataacaggatgcagaattccgggtac
tggcccaatcaaccacatcctaatcactttgccggacccccagcccagcggcctatgcag
aacatcagttttatacctcagcgacctttccaaactgggggattcccgcagcagagacct
gtaaatggggttccaccaccattacctcccagtaactggattgggaagcaaccaagtgga
agtcacatgggtgtacctgcaaaacacgatccaaggacagccccggatagacagcctaag
caggataacccaagattgcaacaggataagagacagcaggctactaccaaggtataccgt
gccaaaactcaagctactaatggtaatggtttgtcagagtcaggtaaacaggaagaatct
gcagcgtaa
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