Miscanthus floridulus: 136514985
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Entry
136514985 CDS
T10264
Name
(RefSeq) transcription factor APG-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
mflo04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136514985
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
136514985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136514985
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136514985
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
136514985
NCBI-ProteinID:
XP_066364785
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Position
17:complement(18410253..18412750)
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AA seq
547 aa
AA seq
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MPVSISVCRTEPGDELAELLWDHGRALRRAPPPFQPFTYSAAGSSRSQELKRHAADATKA
AAFVTPVVPVPLGMHGAGAGLGLGGLPVQDDDDAVPWLHCPVDDDGDGDTAPLPPEYCDS
LLSEYSEADAPAAASHAAAVVPAAPPPEAAAANKLAPPSAAAGGGGEGVVNFTFFSRPLQ
RPQAVASAAATASHPVESTVVQAATNRLRSTPLFSEQRMAWLQPPKAARTTAAPPPPPPP
PPPLAPLLPDSRHGETVAQPRSQPEARPPDAAAVTTSSVCSGNGDLSQLKRSSHLAADCS
VSPDEDLDDEPGATRRSAARLSAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI
DKASMLEEAIEYLKTLQLHVQMMSMGTGLCMPPAMLLPAMHQNMQALHHHPMAHAHAHYP
HLGMGLGFGMGMGATAAAGFDMLPRVAAGAHFPCPAMAMPPPGTMFGVPGQGMPSLPAAF
AHMAGTAPAGQNMEAGAVAAMSCKCKAAGSGSEVRTDERTFFLCRACCSLPVESNSRNVC
FTQDTGL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttcgatttccgtctgtaggaccgagccgggcgacgagctggccgagctgctg
tgggaccacggccgggcgctgcggagggcgccgccgccgttccagcccttcacctacagc
gccgccggcagcagcaggtcccaggagctgaagcgccacgcggcggacgccaccaaggcg
gcagcgttcgtgacccccgtcgtccccgtcccgctgggcatgcacggcgccggcgccggg
ctcgggctcggcggcctccccgtccaggacgacgacgacgccgtgccgtggctgcattgc
cctgtcgacgacgacggcgacggcgacacggcgccgctgcccccggagtactgcgacagc
ctgctgtccgagtactcggaggcggacgcgccagcggcggcctcccacgccgcggccgtc
gtcccggccgcgccgccgcccgaggccgctgcggccaacaagctggccccgccgagcgcc
gccgccggcggaggtggggagggcgtcgtgaacttcaccttcttctcgcggcccctccag
cggccgcaggcggtggcgtcggccgccgcaaccgcgagccaccccgtcgagtccacggtc
gtccaggcggcaacgaaccggctgcggagcacgccgctgttctccgagcagaggatggcg
tggctgcagccgcccaaggcggcgcgcaccacggcggcgccacctccaccaccacctcct
cctcctccgctggcgcctctgctcccagatagccgccatggagagacagtagctcaaccc
cggtcgcaaccagaggcaagacctcccgacgcggcggcggtgacgacctcttcggtctgc
tccggcaacggtgacctgagccagctcaagaggagcagccacctggccgcggactgctcg
gtcagtccggacgaggacctggacgatgagcccggcgcgacgaggaggtcggcggcgcgg
ctgagcgccaagcgcagccgcaccgccgaggtgcacaacctgtcggagaggaggagacgg
gaccggatcaacgagaagatgcgcgccctgcaggagctcatccccaactgcaacaagatc
gacaaggcgtcgatgctggaggaggcgatcgagtacctcaagacgctgcagctgcatgtg
cagatgatgtcgatgggcaccgggctgtgcatgccgccggcgatgctgctgccggcgatg
caccagaacatgcaggcgctgcaccaccaccccatggcgcacgcgcacgcgcactacccc
cacctcggcatggggctgggcttcggcatgggcatgggcgccaccgccgctgcggggttc
gacatgctcccgcgcgtcgcggccggcgcgcacttcccgtgcccggcgatggcaatgccg
ccaccggggaccatgttcggcgtgccggggcaggggatgccctcgctgccggcggcgttc
gctcacatggccggcaccgcgcccgctgggcagaatatggaagctggtgccgttgctgct
atgtcgtgcaaatgcaaagcggcaggctcgggttctgaagtccgaactgacgagcggaca
ttttttttgtgccgtgcctgctgtagcttgcctgtagagagcaactcgaggaacgtttgt
ttcacgcaagatacggggttgtga
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