Miscanthus floridulus: 136517685
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Entry
136517685 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor APG-like
KO
K12126
phytochrome-interacting factor 3
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
mflo04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136517685
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
136517685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136517685
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136517685
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Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
136517685
NCBI-ProteinID:
XP_066367413
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Position
17:14614316..14618974
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AA seq
539 aa
AA seq
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MTGPGDELAELLWDHGPALRRAPPPFQPFTCSAAGSSRSQELKRHAADATKAAAFVTPVV
PVPLGMHGAGAGLGLGGLPVQDDDDAVPWLHCPVVDDGDGDTAPLPPEYCASLLSEYSEA
DAPAAASHAAAVVPAAPPPEAAAANKLAPPSAAAGGGGEGVVNFTFFSRPLQRPQAVASA
AATASHPVESTVVQAATNRLRSTPLFSEQRMAWLQPPKAARTTAAPPPPPPPPPPLVPLL
PDSRHGETVAQPRSQPEARPPNAAAVTTSSVCSGNGDRSQLKRSSHLAADCSVSPDEDLD
DEPGATRRSAARLSAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEE
AIEYLKTLQLHVQMMSMGTGLCMPPAMLLPAMHQNMQALHHHPMAHAHAHTPHLGMGLGF
GMGMGATAAAGFDMLPRVAAGAHFPCPPMAMPPPGTMFGVPGQGMPSLPAAFAHMAGTAP
AGQNMEAGAVAAMSCKCKAAGSGSEVRTDERTFFLYRACCSLPVENNSRNVCFTQDTGL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggccgggcgacgagctggccgagctgctgtgggaccacggcccggcgctgcgg
agggcgccgccgccgttccagcccttcacctgcagcgccgccggcagcagcaggtcccag
gagctgaagcgccacgcggcggacgccaccaaggcggcagcgttcgtgacccccgtcgtc
cccgtcccgctgggcatgcacggcgccggcgccgggctcgggctcggcggcctccccgtc
caggacgacgacgacgccgtgccgtggctgcattgccccgtcgtcgacgacggcgacggc
gacacggcgccgctgcccccggagtactgcgccagcctgctgtccgagtactcggaggcg
gacgcgccagcggcggcctcccacgccgcggccgtcgtcccggccgcgccgccgcccgag
gccgctgcggccaacaagctggccccgccgagcgccgccgccggcggaggtggggagggc
gtcgtgaacttcaccttcttctcgcggcccctccagcggccgcaggcggtggcgtcggcc
gccgcaaccgcgagccaccccgtcgagtccacggtagtccaggcagcaacgaaccggctg
cggagcacgccgctgttctccgagcagaggatggcgtggctgcagccgcccaaggcggcg
cgcaccacggcggcgccacctccaccaccacctcctcctcctccgctggtgcctctgctc
ccagatagccgccatggagagacagtagctcaaccccggtcgcaaccagaggcaagacct
cccaacgcggcggcggtgacgacctcttcggtctgctccggcaacggtgaccggagccag
ctcaagaggagcagccacctggccgcggactgctcggtcagtccggacgaggacctggac
gatgagcccggcgcgacgaggaggtcggcggcgcggctgagcgccaagcgcagccgcacc
gccgaggtgcacaacctgtcggagaggaggagacgggaccggatcaacgagaagatgcgc
gccctgcaggagctcatccccaactgcaacaagatcgacaaggcgtcgatgctggaggag
gcgatcgagtacctcaagacgctgcagctgcatgtgcagatgatgtcgatgggcaccggg
ctgtgcatgccgccggcgatgctgctgccggcgatgcaccagaacatgcaggcgctgcac
caccaccccatggcgcacgcgcacgcgcacaccccccacctcggcatggggctgggcttc
ggcatgggcatgggcgccaccgccgctgcggggttcgacatgctcccgcgcgtcgcggcc
ggcgcgcacttcccgtgcccgccgatggcaatgccgccaccggggaccatgttcggcgtg
ccggggcaggggatgccctcgctgccggcggcgttcgctcacatggccggcaccgcgccc
gctgggcagaatatggaagctggtgccgttgctgctatgtcgtgcaaatgcaaagcggca
ggctcgggttctgaagtccgaactgacgagcggacattttttttgtaccgtgcctgctgt
agcttgcctgtagagaacaactcgaggaacgtttgtttcacgcaagatacggggttgtga
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