Miscanthus floridulus: 136520602
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Entry
136520602 CDS
T10264
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136520602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136520602
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136520602
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Motif
Pfam:
HLH
bHLH_SAC51
Nop53
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
136520602
NCBI-ProteinID:
XP_066370260
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Position
2:28531348..28588657
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AA seq
567 aa
AA seq
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MNQFVHDWSNMGDTSRPLGEDDDLIELLWCNGHVVMQSQTHRKVPPRPDKAAVVAPPPAP
ASVPQEDEGGLWSPFALADSLDKDIFSEFFYEAPAAVEAAATPVASGGTGTEAAVGKSCR
HVVPAEADRRGGACPVSEDPCDLMPPPKSTPASCSRQQTRSLANGGDNAGDLSDLIVRSG
SAGKSAAAGAAAAEAGASSMLSAIGSSICGSNQVLVQRAVGAPGRANANAMGSRGNEASS
SGRSNYCFGTATTTTTTEPTSTSNRSSKRKRLDTEDSESPSEDAESESAAMLARKPPQKM
TTARRSRAAEVHNLSERKRRDRINEKMRALQELIPHCNKQTDKASMLDEAIEYLKSLQLQ
VQATASRHADDVDGQRHRGATGGDVPRRAPVPTADGRRDGPGGGDAVHAAAAVHGRPAAG
GAHQRAGERQPSAGLPGPPPHAGGGGHHGAVRALPRRQPPAAAAVAALRAGRGLLPAAGG
EGHAAADSRASSRAGPRWQHAGRRRARNAAPRERAKQRTRFRARVQLLGRRLGGLEALFL
RSSLVEKMESTSTALLLDVILDVACSE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcgtccatgattggagcaacatgggagacacctccaggccgctcggcgaa
gacgatgacctcattgagctgctctggtgcaacggccatgtcgtcatgcagagccagacc
caccggaaggtgccgccgaggcccgacaaggctgcggtggtggcgcctcctccagccccc
gcgtcggtgccgcaagaagacgagggcggcctctggtcccccttcgcgctggccgactcg
cttgacaaggacatcttctcggagttcttctacgaggcaccagcagcggtggaggcggcg
gcgacaccggtggcctctggtggcaccggcaccgaagccgccgtgggcaagtcgtgcagg
cacgtcgttccagcggaggccgacaggcgcggcggggcgtgcccggtgtccgaggacccg
tgcgacctgatgccgccgcccaagtcgacgcccgcgtcctgctccaggcagcagacgagg
agcctggccaacggcggcgacaatgccggcgacctctcggacctcatcgtccggtcgggg
agcgcggggaagtcggctgcggcgggggcggcggcggcggaggccggcgcgtcgtcgatg
ctgagcgcgatcgggtcgagcatctgcgggagcaaccaggtgttggtgcagcgcgcggtg
ggcgcgccggggcgcgcgaacgcgaacgccatgggcagcaggggcaacgaggcgtcctcg
tcggggcggtccaactactgcttcggcaccgccaccaccaccaccacgaccgagccgaca
agcaccagcaaccggagcagcaagcgcaagcggctcgacaccgaggactcggagagcccc
agcgaggacgcggagtcggagtccgccgccatgttggcgcgcaagccgccgcagaagatg
acgacggcgcggaggagccgcgccgccgaagtgcacaacctctcggagaggaagagacga
gacaggataaacgagaagatgagagccctgcaagagctcatacctcactgcaacaagcag
acggacaaggcgtcaatgcttgacgaggcgatcgagtacctcaagtcgctgcagctgcaa
gtgcaggcaacggcatcgcggcatgcagatgatgtggatgggcagcggcatcgcggcgcc
accggcggtgatgttccccggcgtgcaccagtacctaccgcggatgggcgtcgggatggg
cccggcggcggcgatgccgtccatgccgcggctgccgttcatggccgccccgcagccggt
ggtgcccaccaacgcgcaggtgaacgtcaacccagtgccgggctaccggggccaccacca
catgccggcggcggtgggcatcacggagccgtacgggcactacctcggcgtcagccacct
gcagccgccgccgtcgcagcactacgtgcagggcgtgggctactacccgccgctgggggc
gaaggccatgcagcagcagattccagagcttcatcacgtgccgggccccggtggcagcat
gccggccggcggcgcgcccggaatgctgcccccagagagcgcgccaagcagaggaccagg
ttccgagcccgagtacaactactagggagacgattgggaggattagaggccttgttccta
cgctcaagtttggttgagaagatggagtcgacgtctactgcccttctacttgatgttatt
ctagatgttgcatgctctgagtga
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