Miscanthus floridulus: 136545127
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Entry
136545127 CDS
T10264
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136545127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136545127
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136545127
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
136545127
NCBI-ProteinID:
XP_066393257
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Position
3:complement(18667181..18671171)
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AA seq
515 aa
AA seq
DB search
MRPGPKISDSDANSSSLPYKCWSSERLCSASLEPQAEAAHGFQFSLRRRRLRSEHRWFYP
LFVRHTSCSTAKLRPSILYKKRYLGASGSRKWLLAMDGGERPATSHKAAPFVPDGELVEL
LWQDGAVVAHSQAQAHHHHHHRPLVQVGAGNTGASGVTGEPPALPWLPCSGVAGGAMGGD
VYSQLWQSIAQADGQVVGGDAAGAPRPAAKSGNSGAGSSRTAGEVGSSFCGSNLVVAALH
LDDDVDDVGVAAALPVPMPLDDLAAAGAGASTSSGWNSNAPLPKRGRDEFDEDAEFDTVD
ETPPSSRRPASNKRRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAI
EYLKSLQMQVQIMWMTTGMAPMMIPGAHQLMPLMTMGLNSARMLPPAVQFLSQMQRLPPP
FMNNPLPNQMPQILPPPTNAPSVTDQAQSNRMALPRNPFLHPNDNDALTTPPQVPGLFSY
GQQMVQVNQIQELLTGTAAPALEAELPSSSDGTGT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccggcccaaagatctccgacagcgatgccaactcctcctcccttccatacaaa
tgctggagctcagagagactgtgctccgcctctctcgaaccccaagcagaagcagcccac
ggctttcagttcagtttgcggcgccggcgcctccgatcggagcaccgctggttttatcca
ttattcgtacgacatacaagttgcagcacagcaaagctccgtccatccatcttatacaag
aagaggtatctgggcgcctccgggtccaggaagtggctgctcgccatggacggcggcgag
aggccggcgacgagccacaaggcggccccattcgtccccgacggcgagctcgtggagctg
ctgtggcaggacggcgccgtcgtggcgcactcgcaggcgcaggcgcaccaccaccaccac
caccggccgctggtccaggtcggcgccggcaacacgggcgccagcggcgtcaccggggag
ccacccgcgctgccgtggctcccgtgcagcggcgtcgccggcggcgcgatgggcggggac
gtgtactcgcagctctggcagagcatcgcgcaggccgacggccaagtggtgggcggggac
gctgcgggcgcgccccgcccggccgccaagagcgggaacagcggtgccgggtccagccgg
acggccggggaggtcggctccagcttctgcggcagcaacctcgtggtcgcggcgctgcac
ctggacgacgacgtcgacgacgtaggcgtcgccgcggcgctgccggtgccgatgccgctg
gacgacctggcggccgcgggcgccggcgcgtccacgtccagcggctggaacagcaatgcg
ccgctgcccaagaggggcagggatgagttcgacgaggacgccgagttcgacaccgtcgac
gagaccccgccgtcgtcgaggcggcctgcgtccaacaagcgtaggactcgcgccgccgag
gtccacaacatgtccgagcggaggagaagggaccggatcaacgaaaagatgcgagctctg
caggaactcgtgcctcactgcaacaagaccgacaaagcgtcgatactagatgaagcaatt
gagtacttgaagtccctccaaatgcaagttcagatcatgtggatgactactgggatggcg
ccgatgatgatccccggtgctcaccagctcatgccgctgatgaccatgggcttgaattca
gcgcggatgctgccaccggcggtgcagttcctgagccagatgcagaggctacctccaccc
ttcatgaacaacccgttgccgaatcagatgccccagatcttacctcctcctaccaatgca
cccagtgtaacagaccaagctcaaagcaatcgcatggccctgcccagaaatcccttcctt
catcctaatgataatgatgcactgacaacaccgcctcaggtgccaggtttatttagctat
ggccaacagatggtacaagtgaatcagattcaagagctactgacaggcactgcagctccg
gctttggaggccgagctaccatcatcctctgatggaactggaacataa
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