Miscanthus floridulus: 136545165
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Entry
136545165 CDS
T10264
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136545165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136545165
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136545165
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
136545165
NCBI-ProteinID:
XP_066393290
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Position
3:20306627..20310585
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AA seq
546 aa
AA seq
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MPTPPPFHTNAGAQRDSAPPLSNPKQKQPTGFSSVCGAGASDRSTAGFIHYSYDIQVAAQ
QSSVHPSYTRRGSKQYGCQVSGRLRVQEVAARHGRRREAGDEPQGGPIRPRRRARGAAVA
GRRRRGALAGAGAPPPPPPAAGPGRRRQHERQRRHRGATRAAVAPVQRRRRRRDGRGRVL
AALAEHRAGRRPRGGRGRCGRAPPGRQEREQRCQVQPDGRGGRLQLLRQQPRGRGAAPGR
RRRRRRRRRGAAGADAAGRPGGRGRRRVHVQRLEQQCAAAQEGQGRVRRGCVPRSLLLLP
IGSDCIKNPLQCSVRERKETHLQDAEFDNVDETPPSSRRPASNKRRTRAAEVHNMSERRR
RDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMIPGAHQ
LMPLMTMGLNSARMLPPAVQFLSQMQRLPPPFMNNPLPNQMPQILPPPTNAPSVTDQAQS
NRMALPRNPFLHPNDNDALTTPPQVPGLFSYGQQMVQVNQIQELLTGTAAPALGAELPSS
SDGTGT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcctcctcccttccatacaaatgctggagctcagagagactctgctccgcct
ctctcgaaccccaagcagaagcagcccacgggtttcagttcagtttgcggcgccggcgcc
tccgataggagcaccgctggttttatccattattcgtacgacatacaagttgcagcacag
caaagctccgtccatccgtcttatacaagaagaggtagcaagcagtatgggtgtcaggta
tctgggcgcctccgggtccaggaagtggctgctcgccatggacggcggcgagaggccggc
gacgagccacaaggcggccccattcgtccccgacggcgagctcgtggagctgctgtggca
ggacggcgccgtcgtggcgcactcgcaggcgcaggcgcaccaccaccaccaccaccggcc
gctggtccaggtcggcgccggcaacacgagcgccagcggcgtcaccggggagccacccgc
gctgccgtggctcccgtgcagcggcgtcgccggcggcgcgatgggcggggacgtgtactc
gcagctctggcagagcatcgcgcaggccgacggccgcgtggtgggcggggacgctgcggg
cgcgccccgcccggccgccaagagcgggaacagcggtgccaggtccagccggacggccgg
ggaggtcggctccagcttctgcggcagcaacctcgtggtcgcggcgctgcacctggacga
cgacgtcgacgacgtaggcgtcgccgcggcgctgccggtgccgatgccgctggacgacct
ggcggccgcgggcgccggcgcgtccacgtccagcggctggaacagcaatgcgccgctgcc
caagaggggcagggacgagttcgacgaggttgtgttcctcgttctctgttgctcctgcca
attggttcagattgcataaaaaatccacttcagtgttcagttcgtgagagaaaagaaacg
catttgcaggacgccgagttcgacaacgtcgacgagaccccgccgtcgtcgaggcggcct
gcgtccaacaagcgcaggactcgcgccgccgaggtccacaacatgtcggagcggaggaga
agggaccggatcaacgaaaagatgcgagctctgcaggaactcgtgcctcactgcaacaag
accgacaaagcgtcgatactagatgaagcaattgagtacttgaagtccctccaaatgcaa
gttcagatcatgtggatgactactgggatggcgccgatgatgatccccggtgctcaccag
ctcatgccgctgatgaccatgggcttgaattcagcgcggatgctgccaccggcggtgcag
ttcctgagccagatgcagaggctacctccacccttcatgaacaacccgttgccgaatcag
atgccccagatcttacctcctcctaccaatgcacccagtgtaacagaccaagctcaaagc
aatcgcatggccctgcccagaaatcccttccttcatcctaatgataatgatgcactgaca
acaccgcctcaggtgccaggtttatttagctatggccaacagatggtacaagtgaatcag
attcaagagctactgacaggcactgcagctccggctttgggggccgagctaccatcatcc
tctgatggaactggaacataa
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