Miscanthus floridulus: 136547986
Help
Entry
136547986 CDS
T10264
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136547986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136547986
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
136547986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
136547986
NCBI-ProteinID:
XP_066395756
LinkDB
All DBs
Position
4:7310836..7320055
Genome browser
AA seq
502 aa
AA seq
DB search
MSTPPFHTNAGAPRDCAAPLSNPSRSSPRVSVCGAGASDRGSTGIIHYSYDIQVAVAAQQ
SSIHPSIQEVASRYLGASGSRKWLLAMDGGERPATSHKAAPFVPDGELVELLWQDGAVVA
HHHHHRHPLVQVGAGNTGASGVTGEQAPALPWLPCSGGALGGDVYSQLWQSIAQADGSMV
GADASGVGVSRPPAKSGNSGAGSSRTAGEVGSSFCGSNLVAAALHLDDDIDDVGVAAVAL
PMPLDDPAAAGAGAGASTSIGWNSNALPKRSRDEFDEDADFDTVDEAPPSSRRPASNKRR
TRAAEVHNRSERRRRDRINEKMRALQELVPQCNKTDKASILDEAIEYLKSLQMQVQIMWM
STGMAPMMIPGAHQFMPPMTMGLNSARMPPPAVQFLSQMQRVTPPFMNNPLSNQMPQILP
PPPPTNAPSVTDQAQRNRMALLRNPFLHPNDNDALSTPPQVPSLFGYGPQMVQVNEIQEL
LSGTAAPALGTDLPSSFDGTGT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcctcccttccatacaaatgctggagctccgagagactgtgctgcgcctctc
tccaatccaagcagaagcagcccacgggtttcagtttgcggcgccggcgcctccgatcgg
ggctccactggtattatccattattcgtacgacatacaagttgcagttgcagcgcagcag
agctccatccatccatctatacaagaggttgcaagcaggtatctgggcgcctccgggtcc
aggaagtggctgctcgccatggacggcggcgagagaccggcgacgagccacaaggcggcc
cctttcgtcccggacggcgagctcgtggagctgctgtggcaggacggcgccgtcgtggcg
caccaccaccaccaccggcacccgctggtccaggtcggcgccggcaatacgggcgccagc
ggcgtcaccggggagcaggcgcccgcgctgccgtggctcccgtgcagcggcggcgcgctg
ggcggggacgtgtactcgcagctctggcagagcatcgcgcaggccgacggcagcatggtg
ggcgccgacgcctcgggcgtgggcgtgtcccggccgcccgccaagagcgggaacagcggc
gccgggtccagccggacggccggggaggtcggctccagcttctgcggcagcaacctcgtc
gccgcggcgctgcacctggacgacgacatcgacgacgtcggcgtcgccgcggtggcgctg
ccgatgccgctggacgacccggcggccgcgggcgccggcgccggcgcgtccacgtccatc
ggctggaacagcaatgcgctgcccaagaggagcagggacgagttcgacgaggacgccgac
ttcgacaccgtcgacgaggccccgccgtcgtcgaggcggcctgcgtccaacaagcgcagg
actcgcgccgccgaggtccacaacaggtcggagcggaggagaagggaccgaatcaacgaa
aagatgcgagctctgcaggaactcgtgcctcaatgcaacaagaccgacaaagcgtcgata
ctagatgaggcaattgagtacttgaagtccctccaaatgcaagttcagatcatgtggatg
tctactgggatggcgccgatgatgatcccgggtgctcaccagttcatgcctccgatgacc
atgggcttgaattccgcgcggatgccaccaccagctgtgcagttcctgagccagatgcag
agggtaacaccacccttcatgaacaacccgttgtcgaatcagatgcctcagatcttaccc
cctccccctcctaccaatgcacccagtgtaacagaccaagctcaacggaatcgcatggcc
ctgctgagaaatcccttccttcatcctaatgataatgatgcactgtcaacaccgccacag
gtgccaagtttatttggctatggaccacagatggtacaagtgaatgagattcaagagcta
ctgagtggcactgcagcgccggctttggggaccgacctaccatcatcctttgatggaact
ggaacataa
DBGET
integrated database retrieval system
