KEGG   Miscanthus floridulus: 136549422
Entry
136549422         CDS       T10264                                 
Name
(RefSeq) uncharacterized protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
mflo  Miscanthus floridulus
Pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136549422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136549422
   03041 Spliceosome [BR:mflo03041]
    136549422
   03032 DNA replication proteins [BR:mflo03032]
    136549422
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     136549422
Spliceosome [BR:mflo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    136549422
  U2 snRNP components
    136549422
 Complex B
  U1 snRNP components
    136549422
  U4/U6.U5 tri-snRNP components
    136549422
 Complex C
  U2 snRNP components
    136549422
DNA replication proteins [BR:mflo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     136549422
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 136549422
NCBI-ProteinID: XP_066396788
LinkDB
Position
4:11658646..11662814
AA seq 262 aa
MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPSKSSKTT
GDREERRTLGLLLLRGEEVVSMTVEGPPPPDESRAKAAAAGGALAGPGVGRAAGRGVPTG
PLLQAAPGLAGPVRGVGGPAPGMMQPQISRPPMANLSAQPVSYPQVVRPPQGMPPPMRPG
IPPQMPMQFRPPGVPPAPFPGAPQQFMRGPPPMGPPQMRPGMPGPPPPGMRPGMPPPPFG
QPRPGMPPPPSGPQQPGQNPPQ
NT seq 789 nt   +upstreamnt  +downstreamnt
atgtcgaacccgaagggctccaagatgctccagttcatcaactaccgcatgcgggtgacg
atccaggacgggcgccagctcgtgggcaagttcatggcgttcgaccgccacatgaacctc
gtcctcggcgactgcgaggagttccgccgcctcccgccctccaagtcctccaagaccacg
ggcgaccgcgaggagcgccgcacgctcggcctcctcctcctccgcggcgaggaggtcgtc
tccatgaccgtcgagggcccgccgccgcccgacgagtcgcgcgccaaggctgcggcggcg
ggcggagcactcgccggccccggcgtcggccgcgccgcgggacgcggtgtgcccaccggc
ccgctgctccaggcagctcctggcctcgctggccctgtgcggggcgtcggtggacccgcc
cccggcatgatgcagccccagatctcgcggccgccgatggccaacctgtcggcccagccg
gtgtcttacccgcaggtcgttcgcccaccgcaggggatgcctccgcctatgcgtcctgga
atcccgccgcagatgccgatgcagttccgcccgcctggtgtgccgcctgctccattccct
ggggcaccgcaacagttcatgaggggaccgccgccgatgggtccgccacagatgaggccc
gggatgccggggccaccacctcctggaatgaggcctgggatgcctccgccacccttcgga
cagccgaggccagggatgccgcccccgccgtctggtccacagcagcctggacagaacccg
ccgcagtag

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