Microbacterium foliorum: DXT68_07750
Help
Entry
DXT68_07750 CDS
T05657
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mfol
Microbacterium foliorum
Pathway
mfol03030
DNA replication
mfol03410
Base excision repair
mfol03420
Nucleotide excision repair
mfol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DXT68_07750
03410 Base excision repair
DXT68_07750
03420 Nucleotide excision repair
DXT68_07750
03430 Mismatch repair
DXT68_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfol03032
]
DXT68_07750
03400 DNA repair and recombination proteins [BR:
mfol03400
]
DXT68_07750
Enzymes [BR:
mfol01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DXT68_07750
DNA replication proteins [BR:
mfol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DXT68_07750
DNA repair and recombination proteins [BR:
mfol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DXT68_07750
NER (nucleotide excision repair)
GGR (global genome repair) factors
DXT68_07750
MMR (mismatch excision repair)
DNA ligase
DXT68_07750
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DXT68_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
AXL12042
UniProt:
A0A0F0KA24
LinkDB
All DBs
Position
1684176..1686491
Genome browser
AA seq
771 aa
AA seq
DB search
MPENISLEDARNEADGLTTRILEAKDAYYGRDTSVVDDATYDGWMHRLEELERLHPELQG
QDSPTQMVGVAEATGLATIEHAERMLSLDNVFSIDELREWTAKTRAAAGRDVDWLTELKI
DGLAINLRYENGILTSAATRGDGRVGEIVTENALRLPEIPRELSGEGHPEIVEVRGEVFI
PVAAFERLNAAQATFRERAYADALARWEARGGAKKPFDEEKARTAAARRFPSFANPRNAA
SGGLRQQIDKKDGLELEAGMLRIESLALYVHGIGAWENPPVAAQSQIYETLAEWGLPTSP
HTKVCTSIDEVAAFVEYFGEHRHDIEHELDGIVVKVDELSLHDELGATSRAPRWAIAYKY
PPEEVQTKLLDIVVSVGRTGRATPFAVMAPAHVAGSVVRQATLHNKDVVKAKGVLIGDTV
VLRKAGDVIPEVLGPVVEKRDGTEREFVMPVDCPECGTPLRAMKEGDIDLRCPNARSCPA
QVRGRVEHIGSRGALDIEALGEVTAAALTQPTTPATPPLETEAGLFALTLDEIVPIELFV
RDAETGLPKEDDDGLVKTRAPFRRNPTAAEKKSGLEGPQPSSQALTLLAELEKAKTKDLW
RLLVSLNIRHVGPVAARALAQWFGSLDAIRAASRDELAAVEGVGGIIADSLLAWFDVDWH
QDIVRRWAEAGVQWSTPGHPGPGAAVVEGGVLEGLTVVATGSLDGYTRDGAQEAIIKAGG
KAASSVSKKTDFVAAGPGAGSKLGKAEELGIRILDAAQFHILVTEGPDALG
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagaacatctcgctggaagacgcccgaaacgaagccgacgggctgaccactcgc
atcctcgaggcgaaggacgcgtactacgggcgcgacacctccgtcgtcgacgacgccacc
tacgacggctggatgcaccggctcgaagagctcgagcggctgcatccggagctgcagggt
caggattctcccacccagatggtgggcgtggccgaagcgacagggcttgcgaccatcgag
cacgccgagcgcatgctgagcctcgacaacgtgttctcgatcgacgagctccgtgagtgg
accgcgaagacgcgcgccgcggcaggacgagatgtcgactggctgaccgagctcaagatc
gacggactcgcgatcaatctgcgctacgagaacgggatcctgacgtcggccgcgacgcgg
ggcgacggccgggtcggcgagatcgtcaccgagaacgcgctgcgtctgcccgagatcccc
cgggagctcagcggcgaggggcaccccgagatcgtcgaggtccggggagaggtgttcata
cccgtggccgccttcgaacggctcaacgccgcacaggccacgttccgcgaacgggcctat
gccgacgcgctcgctcgctgggaggcacggggcggggcgaagaagccgttcgacgaagag
aaggcgcgcaccgcggctgcccggcggttcccctcgttcgccaatccgaggaacgcggcg
agcggcggtctgcgtcagcagatcgacaagaaggacggactcgagctcgaagcgggaatg
ctgcggatcgagtcgctcgcgttgtacgtgcacggcatcggcgcctgggagaaccccccg
gtggcggcgcagagtcagatatacgagacgttggccgagtggggactccccacgagcccg
cacaccaaggtctgcacgagcatcgacgaggtcgcggcgttcgtcgagtacttcggagag
caccggcatgacatcgagcacgagctcgacggcatcgtcgtgaaggtcgacgagctgtcc
ctgcacgacgaactgggcgcaacgagccgcgcgccgcgctgggcgatcgcatacaagtac
ccgcccgaagaggtgcagacgaagctcctcgacatcgtcgtgtccgtcgggcggacgggg
cgggccacgcccttcgccgtgatggctcccgctcacgtcgcggggtccgtcgtgaggcag
gcgacgctgcacaacaaagacgtcgtgaaggcgaagggcgtgctgatcggcgacaccgtc
gtgctgcgcaaggcgggcgacgtgatccccgaggtgctcgggccggtcgtcgagaagcgc
gacggcaccgaacgggagttcgtgatgcctgtcgactgccccgaatgcggcacgccgctg
cgcgcgatgaaagagggcgacatcgacctgcgctgcccgaatgcgcgctcatgtcccgcc
caggtgcgcgggcgcgtcgagcacatcggatcccgcggcgctctcgacatcgaggcgctc
ggcgaggtcacggcggcggcgttgacgcagcccacgacacccgccacgccccctctcgag
accgaggcgggcctgttcgccctgaccctcgatgagatcgtgccgatcgagctcttcgtg
cgcgatgccgagacagggttgcccaaagaagacgatgacgggctggtgaagactcgggcg
cctttccgccgcaacccgaccgccgccgagaagaagtccggcctcgaggggcctcagccc
tcatcccaggcgctcacgctgctcgcagagctcgagaaggccaagacgaaggatctctgg
cgtcttctcgtctcgttgaacatccgtcatgtcggccccgtcgccgcgcgtgcgctcgcg
cagtggttcggctcgctcgacgccatccgcgcggcgtcccgtgacgagctcgcggcggtc
gaaggggtcggcggcatcatcgcggactcgctgctcgcctggttcgacgtggactggcat
caggacatcgtgcggcgatgggccgaagccggcgtgcagtggtcgactcccggacacccg
ggaccgggcgctgcggtcgtcgagggcggagtgctcgaggggctcaccgtcgtcgccacc
gggtccctcgacggctacacgcgcgacggcgcgcaggaggcgatcatcaaggcggggggc
aaggccgcgtcgagcgtctcgaagaagaccgatttcgtggcggccgggccgggcgcagga
tcgaagctcggcaaggcggaggagctcggcatccgcatcctcgatgccgcccagttccac
atcctcgtgaccgaagggccggacgcgctcggatga
DBGET
integrated database retrieval system