KEGG   Microbacterium foliorum: DXT68_07750
Entry
DXT68_07750       CDS       T05657                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mfol  Microbacterium foliorum
Pathway
mfol03030  DNA replication
mfol03410  Base excision repair
mfol03420  Nucleotide excision repair
mfol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mfol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DXT68_07750
   03410 Base excision repair
    DXT68_07750
   03420 Nucleotide excision repair
    DXT68_07750
   03430 Mismatch repair
    DXT68_07750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfol03032]
    DXT68_07750
   03400 DNA repair and recombination proteins [BR:mfol03400]
    DXT68_07750
Enzymes [BR:mfol01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DXT68_07750
DNA replication proteins [BR:mfol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DXT68_07750
DNA repair and recombination proteins [BR:mfol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DXT68_07750
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DXT68_07750
   MMR (mismatch excision repair)
    DNA ligase
     DXT68_07750
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DXT68_07750
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT HHH_5 HHH Nlig-Ia PTCB-BRCT RNA_lig_T4_1
Other DBs
NCBI-ProteinID: AXL12042
UniProt: A0A0F0KA24
LinkDB
Position
1684176..1686491
AA seq 771 aa
MPENISLEDARNEADGLTTRILEAKDAYYGRDTSVVDDATYDGWMHRLEELERLHPELQG
QDSPTQMVGVAEATGLATIEHAERMLSLDNVFSIDELREWTAKTRAAAGRDVDWLTELKI
DGLAINLRYENGILTSAATRGDGRVGEIVTENALRLPEIPRELSGEGHPEIVEVRGEVFI
PVAAFERLNAAQATFRERAYADALARWEARGGAKKPFDEEKARTAAARRFPSFANPRNAA
SGGLRQQIDKKDGLELEAGMLRIESLALYVHGIGAWENPPVAAQSQIYETLAEWGLPTSP
HTKVCTSIDEVAAFVEYFGEHRHDIEHELDGIVVKVDELSLHDELGATSRAPRWAIAYKY
PPEEVQTKLLDIVVSVGRTGRATPFAVMAPAHVAGSVVRQATLHNKDVVKAKGVLIGDTV
VLRKAGDVIPEVLGPVVEKRDGTEREFVMPVDCPECGTPLRAMKEGDIDLRCPNARSCPA
QVRGRVEHIGSRGALDIEALGEVTAAALTQPTTPATPPLETEAGLFALTLDEIVPIELFV
RDAETGLPKEDDDGLVKTRAPFRRNPTAAEKKSGLEGPQPSSQALTLLAELEKAKTKDLW
RLLVSLNIRHVGPVAARALAQWFGSLDAIRAASRDELAAVEGVGGIIADSLLAWFDVDWH
QDIVRRWAEAGVQWSTPGHPGPGAAVVEGGVLEGLTVVATGSLDGYTRDGAQEAIIKAGG
KAASSVSKKTDFVAAGPGAGSKLGKAEELGIRILDAAQFHILVTEGPDALG
NT seq 2316 nt   +upstreamnt  +downstreamnt
gtgccggagaacatctcgctggaagacgcccgaaacgaagccgacgggctgaccactcgc
atcctcgaggcgaaggacgcgtactacgggcgcgacacctccgtcgtcgacgacgccacc
tacgacggctggatgcaccggctcgaagagctcgagcggctgcatccggagctgcagggt
caggattctcccacccagatggtgggcgtggccgaagcgacagggcttgcgaccatcgag
cacgccgagcgcatgctgagcctcgacaacgtgttctcgatcgacgagctccgtgagtgg
accgcgaagacgcgcgccgcggcaggacgagatgtcgactggctgaccgagctcaagatc
gacggactcgcgatcaatctgcgctacgagaacgggatcctgacgtcggccgcgacgcgg
ggcgacggccgggtcggcgagatcgtcaccgagaacgcgctgcgtctgcccgagatcccc
cgggagctcagcggcgaggggcaccccgagatcgtcgaggtccggggagaggtgttcata
cccgtggccgccttcgaacggctcaacgccgcacaggccacgttccgcgaacgggcctat
gccgacgcgctcgctcgctgggaggcacggggcggggcgaagaagccgttcgacgaagag
aaggcgcgcaccgcggctgcccggcggttcccctcgttcgccaatccgaggaacgcggcg
agcggcggtctgcgtcagcagatcgacaagaaggacggactcgagctcgaagcgggaatg
ctgcggatcgagtcgctcgcgttgtacgtgcacggcatcggcgcctgggagaaccccccg
gtggcggcgcagagtcagatatacgagacgttggccgagtggggactccccacgagcccg
cacaccaaggtctgcacgagcatcgacgaggtcgcggcgttcgtcgagtacttcggagag
caccggcatgacatcgagcacgagctcgacggcatcgtcgtgaaggtcgacgagctgtcc
ctgcacgacgaactgggcgcaacgagccgcgcgccgcgctgggcgatcgcatacaagtac
ccgcccgaagaggtgcagacgaagctcctcgacatcgtcgtgtccgtcgggcggacgggg
cgggccacgcccttcgccgtgatggctcccgctcacgtcgcggggtccgtcgtgaggcag
gcgacgctgcacaacaaagacgtcgtgaaggcgaagggcgtgctgatcggcgacaccgtc
gtgctgcgcaaggcgggcgacgtgatccccgaggtgctcgggccggtcgtcgagaagcgc
gacggcaccgaacgggagttcgtgatgcctgtcgactgccccgaatgcggcacgccgctg
cgcgcgatgaaagagggcgacatcgacctgcgctgcccgaatgcgcgctcatgtcccgcc
caggtgcgcgggcgcgtcgagcacatcggatcccgcggcgctctcgacatcgaggcgctc
ggcgaggtcacggcggcggcgttgacgcagcccacgacacccgccacgccccctctcgag
accgaggcgggcctgttcgccctgaccctcgatgagatcgtgccgatcgagctcttcgtg
cgcgatgccgagacagggttgcccaaagaagacgatgacgggctggtgaagactcgggcg
cctttccgccgcaacccgaccgccgccgagaagaagtccggcctcgaggggcctcagccc
tcatcccaggcgctcacgctgctcgcagagctcgagaaggccaagacgaaggatctctgg
cgtcttctcgtctcgttgaacatccgtcatgtcggccccgtcgccgcgcgtgcgctcgcg
cagtggttcggctcgctcgacgccatccgcgcggcgtcccgtgacgagctcgcggcggtc
gaaggggtcggcggcatcatcgcggactcgctgctcgcctggttcgacgtggactggcat
caggacatcgtgcggcgatgggccgaagccggcgtgcagtggtcgactcccggacacccg
ggaccgggcgctgcggtcgtcgagggcggagtgctcgaggggctcaccgtcgtcgccacc
gggtccctcgacggctacacgcgcgacggcgcgcaggaggcgatcatcaaggcggggggc
aaggccgcgtcgagcgtctcgaagaagaccgatttcgtggcggccgggccgggcgcagga
tcgaagctcggcaaggcggaggagctcggcatccgcatcctcgatgccgcccagttccac
atcctcgtgaccgaagggccggacgcgctcggatga

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