Montipora foliosa: 137998052
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Entry
137998052 CDS
T10576
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
mfoo Montipora foliosa
Pathway
mfoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137998052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137998052
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
137998052
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
TDP-43_N
RRM_PARP14_3
RRM_7
Nup35_RRM_2
RRM_PARP14_1
RRM_Nup35
DUF1866
Motif
Other DBs
NCBI-GeneID:
137998052
NCBI-ProteinID:
XP_068700550
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Position
3:complement(66963969..66976316)
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AA seq
358 aa
AA seq
DB search
MAQYVRVTEDESLPAIELPTESDGAILLSTLQAQFPGACGLRYKNPETDAWRGIRLMENM
LCPPADQGWGCHLYVVVQKNDGTTKRKIEESPNAIKEPETKMTKISSADEARVGDLIVLG
LPWRTTSEDMKAYFEKFGEVTLAEVKLDYQSGKSRGFGFVHFKDPEVEKTVLSQVHHIQG
RTCEVTLPRSKQDVMLKKLFVGRLPEGTTENDLLEHFSKFGEIIDVYIPKPMRGISFVTF
ASGEVAKKVQSQNHRLGTTLLNVSFAEPKATKNVHMAPQFHGMQSLSSRNSPSWGGGTGA
SGIGFDMYGLNSFSEGGRQNIPYNMSAAYNSMMHSMLNMGNPSNTGSSSMLGNRNNRR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatacgtgagagttaccgaagacgagtctcttcctgccatcgaactccctacc
gagtcagacggagctattttgctttccacgttacaggcacagtttccgggtgcttgtgga
ttaagatataaaaaccccgaaacagacgcttggcggggaattcgtctgatggaaaacatg
ctttgtcccccagctgaccagggatggggctgtcatctctacgttgttgttcagaaaaat
gatggcaccactaaaagaaaaatagaagaatcaccaaatgcaataaaggaaccagagaca
aaaatgaccaagatttcttctgctgatgaagcaagagtgggtgatcttattgtgttagga
cttccttggaggactacatctgaggacatgaaagcgtactttgagaagtttggtgaagtc
accttggctgaggtaaaactagactaccagagtggcaagtcccgtggatttgggtttgta
cactttaaggatccagaagttgaaaaaacagttttatcccaggttcatcatattcagggt
cgcacttgtgaggtgacgctgccaagaagtaagcaagatgtcatgctaaagaagctgttt
gttggtcgtctgcctgagggaacaacagaaaatgatcttctggaacattttagcaagttt
ggtgaaattattgatgtctacataccaaaacctatgcgtggaatttcatttgtgaccttt
gcatcaggagaagtggcaaaaaaagtacagtcccaaaaccaccgccttggaactactttg
ctgaatgtgagctttgcagagcctaaagcaacaaaaaatgtccacatggcaccacaattt
cacggcatgcaatctttgtcatctcgtaactctccttcttggggagggggtactggtgct
agcggcataggtttcgacatgtatgggttgaattccttttcagaaggtggtcggcaaaat
attccatataacatgtcagctgcctacaactccatgatgcacagcatgttaaacatgggc
aacccatcaaacactggatcctccagcatgttggggaacagaaacaaccgcagatga
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