Entry |
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Name |
(RefSeq) DNA ligase 4-like
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KO |
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Organism |
mfoo Montipora foliosa
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Pathway |
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Brite |
Enzymes [BR:mfoo01000]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138003660
DNA repair and recombination proteins [BR:mfoo03400]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
138003660
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SSDB |
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Other DBs |
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LinkDB |
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Position |
5:12793491..12841865
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AA seq |
919 aa
MEGDSNAGVAAQVPFYDLCCLLEKISETSGTDKKKKILSTFVSSWREAHGKLHKDTSKTT
DSFYSAMRLLLPQLDKERGAYGIKEVVLAKYYIDILSIGKDSVDGRKLLNYRAPKNAKQD
SVADFASVAYFVLKNRCPEKGSLKIAQVNKHLDDVAQANVERKREDVKKALQFLLRNTSA
LEQKWLIRIIFKELKVGLSENSVFNVFHPDAVELYSVCNSLSKVCTDLHDPTIRMNEAQM
SLFSPFRPMLAERGAIEEVEKIMKNQAFYIETKIDGERMQLHKEKDVFMYFSRSANDHTH
TFGANPSSGVLTPHIAGCFSSSVHSCILDGEMIVVDPATDVWLSKGMNMDVKSLTTYENG
YHPCFVVFDILVINDKKLANVPLCERIKTMEKVLRPRPGYFQFVERQDASSRGDVVKALN
EAIDKREEGLVIKSPSSIYKPNVRSGSGWIKIKPEYVDSLSDEMDLLIVGGYFGVGRRSG
MISHFMCAVAVPSGIPGQHPSVFHSFCKVGTGYTMNELNELHQLLHPHWRPFDTKKPPDS
VILASGYKEKPDVWIEPTKSKIVQVKAAEIIASDKFKTGFTLRFPRVEAIRKDKMWYECL
SLKELEKLKSMAEGKLTYQHTHSEHSSEPARKRRREALRVEHVTSVAEHFKPADLSSVKQ
VSQMFEGREFYIVNGPSTHTKAILEKKVAENGGTFTQNPSPDTFCVIAGRINVRVKNIIS
QKQYDVVQASWLIKCLENGQVDPWQPSDMLHCSPGTADRFAEEYDRFGDSYAQDATVESL
KEVFNNVQNQNASVPLSRDDLLDVMEHYFPDNSPMSLFKHCRVYVDLYTGIGDSSTRIPN
SSLELVGLQVRLYGAQITDTLDNRVTHIILDESDLTRFEQLQRADERSSKQRHFVTQDWV
TQSVQERKLLTERHFRPST |
NT seq |
2760 nt +upstreamnt +downstreamnt
atggagggagattccaacgctggagtcgcagctcaggttccgttttatgatttatgttgc
ttgttggaaaaaatttcggaaacttcaggtactgataagaaaaagaagattttgtcaaca
ttcgtgagttcttggagagaggcgcatggcaagcttcacaaggatacttcgaaaacaact
gattcgttttactctgcaatgcgactcctgttaccacaactggacaaagaaagaggagcg
tatggaataaaggaggttgtactggcaaaatattacattgatattctaagcattggtaag
gatagtgtggatgggcggaaactgttgaattacagagctcccaaaaatgctaaacaggat
tcagttgctgattttgcaagtgtcgcctactttgttttgaaaaacagatgtccagagaag
ggaagtttaaaaattgctcaagttaacaagcatcttgatgatgtggcacaagcaaatgtt
gaacgcaaacgtgaagatgtcaagaaagccttacagtttcttctacgaaacacaagtgcc
cttgagcagaagtggttaatcaggattatcttcaaggaactgaaggttggccttagtgag
aattctgtgttcaatgttttccatcctgatgctgtggagctctatagtgtttgtaacagt
ttgtccaaggtgtgcactgatcttcatgaccctacaatcagaatgaatgaagcacagatg
tctttattctcaccattcagaccaatgttagcagaacgaggagctattgaagaggtagaa
aagatcatgaagaatcaagcattttacatagaaacaaaaatagatggagaaaggatgcaa
ctccacaaagaaaaagatgtctttatgtacttttctagaagtgcaaatgatcacacccac
acatttggcgcaaatccgtcttcaggagttctcacaccacatattgctggctgtttctca
agctcagtgcattcctgtatattggatggtgaaatgattgtggttgatcctgcaacagat
gtttggctatcaaaagggatgaacatggatgtaaagtctttaactacttatgaaaatggc
taccatccttgtttcgtcgtgtttgatatccttgttatcaatgacaagaaacttgccaat
gtgcccctttgtgaaagaatcaaaaccatggaaaaagtactgcgaccaaggcctggatat
tttcagtttgtcgaaaggcaggatgcatcatcgagaggagacgttgtaaaagctctaaat
gaggcaatcgataaaagagaagagggattggtcatcaaatcgccatcctcgatttataaa
ccgaacgtgagaagtggaagtggctggataaaaatcaagcctgaatatgttgatagtttg
agtgatgagatggatctcttaatcgttgggggctatttcggagttggtcgtcgcagtgga
atgatatctcattttatgtgtgccgtggcagtgccatctggtatcccagggcaacatcct
tcagtgtttcactcattttgcaaggttggaaccggttacacaatgaatgagttgaacgaa
ctacatcaattattacatccccattggcggccatttgatactaaaaagcctcctgattca
gttattttagcttccggttacaaagaaaagccagatgtttggatcgagccaaccaaatca
aagattgtgcaggttaaggctgcagaaattatcgcttcagacaagttcaaaactggcttc
acacttcgttttccaagagtagaggcaataaggaaagataagatgtggtacgaatgcttg
agtttaaaggaacttgaaaagctaaaatcgatggctgaaggcaaactgacgtaccaacac
actcattcagagcattcatctgagcctgcgagaaagaggcgaagggaagctttaagggtg
gaacacgtgaccagtgtagccgagcatttcaaaccagctgatttgtcatctgtgaaacaa
gtgtcgcaaatgtttgaaggcagggagttttatattgtcaacggtccttcaactcatacc
aaagccattctggagaagaaagttgcagagaacggaggtacattcactcaaaacccatcg
ccagatacattctgtgttattgccggaagaataaacgtgagagtgaagaacataataagt
cagaaacaatatgatgttgtacaagcgtcgtggctaataaagtgcttggaaaatggacag
gtggatccatggcaaccaagtgacatgttgcattgctcgcctggcaccgctgacaggttc
gcagaggaatatgatcgctttggtgatagctacgctcaggatgccaccgtggaatctctc
aaagaagtttttaacaatgtccaaaatcagaatgcttcagttcctctgtcaagagacgac
ctcctagatgtaatggagcactattttccagataattcacccatgagcctctttaaacat
tgcagggtttacgtcgatctatacactggtattggggacagctcaacgcgcattcccaac
agcagcctggaacttgttggcttgcaagttcgcttgtatggagctcaaatcacggacact
ttggataatagagtgacacatattattcttgatgaaagtgacttgacacgttttgaacaa
ctccaaagagcggacgaaagatcctcaaagcagcgtcattttgtcacgcaagactgggta
acgcagtctgtacaagaaaggaagcttttaacagaaagacattttaggccttcaacttag |