Montipora foliosa: 138003666
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Entry
138003666 CDS
T10576
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
138003666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoo03400
]
138003666
Enzymes [BR:
mfoo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138003666
DNA repair and recombination proteins [BR:
mfoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
138003666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT_2
DNA_ligase_IV
BRCT
DNA_ligase_A_C
PTCB-BRCT
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
138003666
NCBI-ProteinID:
XP_068705954
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Position
5:12993043..13035284
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AA seq
588 aa
AA seq
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MIVVDPATDVWLSKGMNMDVKSLTTYENGYHPCFVVFDILVINDKKLANVPLCERIKTME
KVLRPRPGYFQFVERQDASTRGDVVKALNEAIDKREEGLVIKSPSSIYKPNVRSGSGWIK
IKPEYVDSLSDEMDLLIVGGYFGVGRRSGMISHFMCAVAVPSGIPGQHPSVFHSFCKVGT
GYTMNELNELHQLLHPYWRPFDTKKPPDSVILASGYKEKPDVWIEPTKSKIVQVKAAEII
ASDKFKTGFTLRFPRVEAIRKDKMWYECLSLKELEKLKSMAEGKLTYQHTHSEHSSEPAR
KRRREALRVEHVTSVAEHFKPADLSSVKQVSQMFEGREFYIVNGPSTHTKAILEKKVAEN
GGTFTQNPSPDTYCVIAGRINVRVKNIISQKQYDVVQASWLIKCLENGQLDPWQPSDMLH
CSPGTADKFAEEYDRFGDSYTQDATVESLKEVFNNVQNQNASVPLSRDDLLDVMEHYFPD
NSPLSLFKHCRVYVDLYTGIGDSSTRIPNSSLELVGLQVRLYGAQITDTLDNRVTHIILD
ESDLTRFEQLQRADERSSKQRHFVTQDWVTQSVQERKLLTERHFRPST
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggttgatcctgcaacagatgtttggctatcaaaagggatgaacatggatgta
aagtctttaactacttatgaaaatggctaccatccttgtttcgtcgtgtttgatatcctt
gttatcaatgacaagaaacttgccaatgtacccctttgtgaaagaatcaaaaccatggaa
aaagtactgcgaccaaggcctggatattttcagtttgtcgaaaggcaggatgcatcaacg
agaggagacgttgtaaaagctctaaatgaggcaatcgataaaagagaagagggattggtc
atcaaatcgccatcctcgatttataaaccgaacgtgagaagtggaagtggctggataaaa
atcaagcctgaatacgttgatagtttgagtgatgagatggatctcttaatcgttgggggc
tatttcggagttggtcgtcgtagtggaatgatatctcattttatgtgtgccgtggcagtg
ccatctggtatcccagggcaacatccttcagtgtttcactcattttgcaaggttggaacc
ggttacacaatgaatgagttgaacgaactacatcaattattacatccctattggcggcca
tttgatactaaaaagcctcctgattcagttattttagcttccggttacaaagaaaagcca
gatgtttggatcgagccaaccaaatcaaaaattgtgcaggttaaggctgcagaaattatc
gcttcagacaagttcaaaactggcttcacacttcgttttccaagagtagaggcaataagg
aaagataagatgtggtacgaatgcttgagtttaaaggaacttgaaaagctaaaatcgatg
gctgaaggcaaactgacgtaccaacacactcattcagagcattcatctgagcctgcgaga
aagaggcgaagggaagctttaagggtggaacacgtgaccagtgtagccgagcatttcaaa
ccagctgatttgtcatctgtgaaacaagtgtcgcaaatgtttgaaggcagggagttttat
attgtcaatggtccttcaactcataccaaagccattctggagaagaaagttgcagagaac
ggaggtacattcactcaaaacccatcgccagatacatactgtgttattgccggaagaata
aacgtgagagtgaagaacataataagtcagaaacaatatgatgttgtacaagcgtcgtgg
ctaataaagtgcttggaaaatggacagctggatccatggcaaccaagtgacatgttgcat
tgctcgcctggcaccgctgacaagttcgcagaggaatatgatcgctttggtgatagctac
actcaggatgccaccgtggaatctctcaaagaagtttttaacaatgtccaaaatcagaat
gcttcagttcctctgtcaagagacgacctcctagatgtaatggagcactattttccagat
aattcacctctgagcctctttaaacattgtagggtttacgtcgatctatacactggtatt
ggggacagctcaacgcgcattcccaacagcagcctggaacttgttggcttgcaagttcgc
ttgtatggagctcaaatcacggacactttggataatagagtgacacatattattcttgat
gaaagtgacttgacacgttttgaacaactccaaagagcggacgaaagatcctcaaagcag
cgtcattttgtcacgcaagactgggtaacgcagtctgtacaagaaaggaagcttttaaca
gaaagacattttaggccttcaacttga
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