Montipora foliosa: 138013369
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Entry
138013369 CDS
T10576
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mfoo Montipora foliosa
Pathway
mfoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138013369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfoo03041
]
138013369
Spliceosome [BR:
mfoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138013369
Complex C
U5 SnRNP specific factors
138013369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
138013369
NCBI-ProteinID:
XP_068716522
LinkDB
All DBs
Position
8:47946993..47978800
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AA seq
972 aa
AA seq
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MEADLYDEFGNYIGPEIESDEESEDEDELGEEEAVEYAEDEEDEQMDQDEPQMQVVLHED
KKYYPTAEEVFGPEVETIVQEEDTQPLTEPIIKPVANKKFFHAEQDLPATNYDVEYLADL
MDNPELIRNVALAGHLHTGKSVFVDCLIEQTHPDIQAKEGTDLRYADTLFTEQERGLSIK
SVPVSLVLPDTKGKSFLVNTFDTPGHVNFSDEVTAALRMCDGVMIFIDASEGVMLNTERL
LKHAVQEKVAVTICINKIDRLILELKLPPTDAYYKLKHIVDEVNGLLSVYSDANDEYVMS
PYLGNVCFASSQYRCCFTLYSFASLYVDTFGGGIDPKDFAKRLWGDMYFNSKSRKFTRKA
PLSTSQRSFVEFILEPLYKIFSQVVGDADICLPKLLDELGIHLSKSEMQMNIRPLLSLVC
RRFFGDFTGFVDVCVKHIPSPKSAAKSKVEHVYTGPLDTEVAEFMCDCDPEGPLMLHTSK
QYPSQDATAFHVFGRVMSGTIHAGQQARILGENYTIEDEEDSRVGTVGRLWIAEARYNIE
VNRVPAGNWVLIEGIDEPIVKTSTITQVQGNDEAYIFRPLKFNTCSAIKIAVEPHNPSEL
PKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCVLHDLRKMYSEIDIKVADPVV
AFCETVVETSSLKCFAETPNKKNKVTMIAEPLEKGLAEDIENEKVLITWNKKKLGEFFQT
KYDWDLLAARSIWAFGPDNSGPNILVDDTLPSEVDKSLLNTVKDSIIQGFQWATREGPLC
DEPIRNVKFKILDAVIAGEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYFFVEVQAPA
DCVSSVYTVLARRRGHVTQDAPVPGSPLYTVKAFIPAIDSFGFETDLRTHTQGQAFCLSV
FHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLE
LARQDVMFNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgatttgtatgatgaattcggaaactacattggcccagaaatcgaaagtgac
gaggaaagcgaagacgaagatgaacttggagaagaggaagctgtagaatatgcagaagat
gaggaagatgagcagatggaccaggatgagccccaaatgcaagtcgttttacatgaggat
aaaaagtattatcctaccgcagaggaagtttttggtccagaggtggagactatagtgcag
gaagaagacacacagccattaactgaacccatcattaaacctgtggcaaataagaagttc
tttcatgctgaacaggatttgccagcaacaaattacgatgttgagtatttggctgatttg
atggacaaccctgagctgataagaaatgtggcactggctgggcatttgcacactggaaag
tctgtttttgtagactgtctaattgaacaaactcacccagacattcaagcaaaggaaggg
acagatcttcgctatgctgacacattgttcactgagcaagagcgaggtttaagcataaag
agtgttccagtctctcttgttttgcctgacaccaaaggaaagtcatttttggtcaatact
tttgatacaccaggacatgtgaacttctctgatgaagttactgcagcactgcgaatgtgt
gatggtgtgatgattttcattgatgcatcagaaggcgttatgttgaatacagaaagactc
ctcaaacatgccgttcaagaaaaggttgctgtgaccatttgtataaacaagatcgatcga
cttattttggaactaaagttaccaccgacagatgcttattacaaactaaaacacatagtc
gatgaagtcaatggactcttgagtgtgtactctgatgccaatgatgaatatgtcatgtcg
ccttaccttgggaatgtgtgctttgccagttcacaatacagatgctgcttcactctttat
tcttttgcatctctttatgtagacacctttggtggtggaattgatccaaaagactttgcc
aaacgactttggggtgatatgtacttcaattctaaatcacggaagttcactcgcaaggca
cctctgagtacctctcaaaggagctttgtggagtttatcctggaacctttgtacaaaata
ttttcacaggttgtaggggatgcagatatctgtcttcctaaacttcttgatgagcttggt
attcacctttcgaagtctgagatgcagatgaatatcagacctcttcttagtttggtctgt
cggagattctttggagattttacagggtttgtagatgtgtgtgttaaacacataccgtct
cccaaatctgcagcaaaatcaaaggtcgaacatgtttacacgggaccactggatactgaa
gttgcggaattcatgtgtgactgcgaccctgagggaccactgatgcttcatacgtccaaa
caatatccatcacaggatgccacagcctttcatgtgtttggccgagttatgagtggaaca
attcatgctggacagcaagctagaattctcggcgagaactacactatagaagacgaggaa
gactctcgagttggaacggttggcagactttggattgcagaagccagatacaatattgaa
gtcaaccgagtgcctgctggaaactgggtactgattgaaggaatagacgaacctattgtg
aagacgtcgacaatcacgcaagtacagggcaatgacgaggcttacatctttaggccgctg
aagttcaacacctgttcagccatcaagattgccgtcgaacctcacaatccttccgagttg
cctaaaatgttggacggcttaagaaaagtcaacaagagctatccacttctaactacaaag
gttgaagaatctggagagcatgttattcttggtacaggcgagctttacttggactgtgtg
ctacacgatttgagaaaaatgtactccgagatagatattaaagttgctgatcctgttgta
gcattctgtgaaacagtcgtggagacttcatcattaaagtgttttgcagaaacaccaaac
aagaagaataaggtcaccatgatcgccgaacctctggagaaaggcttagccgaggatatt
gagaatgagaaagtgcttattacttggaacaaaaagaaacttggagagtttttccaaaca
aaatacgactgggatttgctagcggctcgttcaatatgggcgtttgggcctgacaactcg
ggtccaaacattcttgtggacgatacactgccatctgaggtggacaagagtctcctaaac
acggtcaaagattccatcatccaaggttttcagtgggccacaagagaaggaccgctgtgt
gacgaacctataaggaatgtgaaattcaagattctggacgcagtgatagccggtgaacct
atccacaggggtggtggccaagtcattccaacagccagacgagttgcttactctgccttc
ctgatggccactcctcgtttgatggagccatattttttcgttgaggtccaggcccccgct
gactgtgtctcctcggtgtacaccgtgctcgcacgaagaagaggccatgttacccaggat
gcacctgttcccggctcgcctttgtacacagtgaaagcgttcattcccgccatcgactcg
tttggatttgaaaccgatcttaggacccacacacagggacaagccttctgtctttcagtg
tttcatcattggcagattgttcctggtgatccactcgataaaagcatcacaatccgtcca
ttagaacctcaaccggctacccatctcgcccgggaatttatgatcaagacacggagaaga
aagggtctgagcgaagatgtcagcatcaacaagttcttcgacgatcctatgttgctggag
ttggctcgacaagatgtcatgttcaattatccgatgtga
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