Alexandromys fortis (reed vole): 126491500
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Entry
126491500 CDS
T08493
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04360
Axon guidance
mfot04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
126491500
09158 Development and regeneration
04360 Axon guidance
126491500
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mfot01009
]
126491500
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126491500
Protein phosphatases and associated proteins [BR:
mfot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126491500
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126491500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
126491500
NCBI-ProteinID:
XP_049983173
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLSAVEKGDYGTVKQALQEAEIYYN
VNINCVDPLGRNALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PGREKQIPTLLMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEDLDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLVTCVTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKAIDEPNNCKGIRCERQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFMYLGNWFNKTFCPKRDADGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKQPRRSFSTSSAEFSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGAPLIRTMPRASGTHEKSKAESSSKRSFMG
PSFKKLGLLFSKFNGQSSEPTTSEPMYTISDAIAQQHYMWEDIRYSQMEKGKAEACSKSD
LNLSEVELGEIRGAARSSECPLACSSSFHCVSSICSSNSKLLDSSEDVFETWGEACDLIM
HKWGDKQEEQVTTRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaagaaggtcaattactcaccttacagagaccgcattcccctg
caaatcgtgagggctgagacggagctctctgctgaggagaaggccttccttagtgctgtg
gagaagggggactatggcaccgtgaagcaggcgctgcaggaggctgagatctactacaat
gtcaacatcaactgcgtggatcctttgggcaggaacgccctgctcattgccatcgagaac
gagaacttggagatcatggagctactgctgaaccatagcgtgtatgtgggcgatgcatta
ctctatgccatccgcaaggaagtggtgggcgctgtggagcttctgcttagctacaggaag
cccggtagagagaagcagatacccactctgcttatggacacccaattctctgagttcaca
ccagacatcactcccatcatgttggccgcccacaccaacaactatgaaatcatcaaattg
ctcgtccaaaagcgggtcactattccacggccccaccaaatccgctgcaactgtgtggag
tgtgtgtccagctcagaggtagacagcctgcgccattcaaggtcccgactgaacatctac
aaggctttggcaagcccctcactgattgccttatcaagcgaggaccccatcctcactgcc
ttccggctgggctgggaactcaaggagctaagcaaggtggaaaatgagttcaaggctgag
tatgaggagctctctcagcaatgtaagctctttgccaaggacctgctagaccaagcgcgc
agctcgcgagaactagagatcatcctcaaccatcgagatgaccacagtgaagaccttgac
ccacagaagtaccatgacctagccaagctgaaggtggcaatcaaatatcaccagaaagag
tttgttgctcagccaaactgccaacaattgcttgccactttgtggtatgatggcttccct
ggatggcggagaaagcactgggtagtcaagcttgtgacctgtgtgaccattggcttcctg
tttcctatgctgtctattgcctatctgatctcacccaggagcaaccttgggctcttcatc
aagaagccctttatcaagttcatctgccacacagcttcctatctgaccttcctcttcatg
ctcctcctggcctctcagcatatcgtcaggacagacctccatgtacaagggcctccccca
actattgtggaatggatgattctgccttgggttctaggtttcatttggggggagataaag
gaaatgtgggatggtggattcacggaatacatccatgattggtggaacttaatggatttt
gcaatgaactccctctacctggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccaactctgattgcagaggcg
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccttgttcacagccaat
tcccacttagggcctctgcagatctctttgggacgcatgctgctcgatatactcaaattc
ctctttatctactgcctagtactgctggcttttgccaatggactgaaccagctttatttt
tactatgagaccaaagctatcgatgaacctaacaactgcaaggggatacggtgtgagaga
cagaacaacgccttctccacgctctttgaaaccctccagtcactcttctggtctgtattt
ggccttttaaatctctacgtcaccaatgtgaaggccaggcatgagttcaccgagtttgtg
ggagctactatgtttggaacatacaacgtgatctctctggtagtgctgctgaacatgctc
attgccatgatgaataactcctaccagcttattgccgatcatgctgacattgagtggaaa
tttgcaagaacaaagctctggatgagttattttgatgaaggtggtaccttgccacctcct
ttcaacattatccccagccccaaatcatttatgtatcttggcaactggttcaataaaacc
ttctgtccaaaaagagacgctgatggaagacgaaggagacacaacttgagaagcttcaca
gaacgccatgctgatagcctgatccaaaatcaacattatcaggaagttatcagaaattta
gtcaagagatatgtggctgcaatgataagaaactccaaaacaaatgagggattaacagaa
gaaaactttaaggaattaaaacaggacatctcaagctttcgatatgaagtacttgacctc
ttgggaaacagaaaacaaccaagaagaagcttttccactagcagtgctgaattctctcaa
agggatgataccaatgatggcagtggtggggcacgggccaaatctaagagtgtctctttc
aatttaggctgcaagaaaaaggcctgccatggggcacctctcatcagaaccatgccaaga
gccagtggtactcacgagaagtcaaaagcagagtcatcaagcaaacggtccttcatgggc
ccctctttcaagaaactgggtctcctattctccaagtttaatggtcagagctctgagcct
actacgtcagagccaatgtacacaatctccgatgccattgcccagcagcattatatgtgg
gaggacatcagatattctcagatggagaaagggaaggcagaggcctgttctaaaagcgat
ttgaacctcagtgaggtagagttaggtgaaatccggggtgctgctcggagcagtgaatgc
cccctagcctgttccagctcttttcactgtgtatccagcatctgctcctcaaattctaaa
cttttagactcatcagaggatgtgtttgaaacttggggagaggcttgtgacttgatcatg
cacaaatggggtgataaacaggaagaacaagttacaactcggctctaa
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