Alexandromys fortis (reed vole): 126497359
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Entry
126497359 CDS
T08493
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126497359
03012 Translation factors [BR:
mfot03012
]
126497359
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126497359
5.6.2.6 RNA 3'-5' helicase
126497359
Spliceosome [BR:
mfot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126497359
Translation factors [BR:
mfot03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126497359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
AAA_19
ResIII
AAA_22
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
126497359
NCBI-ProteinID:
XP_049991296
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIVPPPPILTDTSDSTASTGEGAPPPMGGPLPPHLAL
KAAENNSGVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWT
LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKL
AAQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSPDLEHQLQNVVQELDLEI
VPPPIDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYAST
EQISMDLKNELTYQLEQDHNLQSVLQEREMLPVKKFEPEILEAISQNSVVIIRGATGCGK
TTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFES
ILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEV
RIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFVPPPKDKKKKDKE
DDGGEDDDANCNLICADEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL
PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE
TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC
SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR
ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEG
KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAK
VQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEG
RNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQS
DGQIIFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQ
ISRPSAAGINLMIGSVRYGDGPRPPKMARYDNGSGFRRGYGGGGYAGGGYGGGYGGGGFG
GGFGSGGGGFGGGFNSGGGGFGSGGGGFGSGGGGFGGGGGGFGGGGGNFGGGRGGNFGGS
GGFGSSGGGYGGGGGGYGGGGSGGGGYGGGSGGYGGGGGGYGGGEGYNISPNSYRGNYGG
GGGGGGGGYRGGSQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGGFQRRGGYGGGYFGQGR
GGGGGGGGGY
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattaaaaattttctgtatgcctggtgtggcaaaaggaagatgacccctgcc
tatgaaattagagcagtaggaaacaaaaacagacagaaattcatgtgtgaggttcgagta
gaagggtttaattatgctggtatgggtaattccaccaataaaaaagatgcacagagcaat
gctgccagagactttgtcaactatttggttcgaataaatgaagtaaagagtgaagaagtt
ccagccgttgggattgtaccacccccacccatacttacggacacatctgatagcacagca
agtactggagaaggtgcaccaccacccatgggaggaccacttcctccacatctggctctc
aaagcagcagagaataattctggagtagagtcttcatctggctatggttctcctggaccc
acctgggacagaggagccaatttaaaagactactactcaagaaaggaggaacaagaagtg
caagcgactctagagtcagaagaagtggacttaaatgctgggcttcatggaaactggaca
ttggaaaatgctaaggctcgcttgaaccagtatttccaaaaagaaaagatccaaggagaa
tataagtacacccaagtgggtcccgatcacaacaggagctttattgcagaaatgaccatt
tatatcaagcagctgggcagaaggattttcgcacgtgaacatggatcaaataagaaatta
gcagcacaatcatgtgccctctctcttgtccgacaactctatcatcttggagtgattgag
gcgtactctgggcttacaaagaagaaagaaggagagagagttgagccttacaaagttttc
ctctctcctgatttggagcatcaactgcaaaatgtggttcaagagctagatcttgaaatt
gtgcctccacccattgatccttctatgccagttatactcaacattgggaaattggctcat
tttgaaccatctcagagacaaaacgcagttggagtcgtaccttggtcaccaccacagtcc
aactggaatccttggactagtagcaacattgatgaagggcccctggcttatgcttctact
gaacaaataagcatggatcttaagaatgaattaacataccagctggaacaggatcataat
ttacaaagtgtattacaagagagagagatgcttcctgtgaagaaatttgaacctgaaatc
ctggaagccattagtcaaaattcagttgtgatcattcgcggggccactggatgtggtaaa
accacacaggttccacagtacattttggatgactttatccagaatgacagagcagcagag
tgtaatattgttgtgactcagcccagaaggatcagtgcagttgcagtggctgaacgagtt
gcttatgagagaggtgaagagcctggaaaaagctgtggttacagtgttcggtttgagtct
atactcccacgcccccatgccagtataatgttttgtactgtaggcgtactcctaagaaaa
ttagaagcaggcattcgagggatcagtcatgtaattgtagatgaaattcacgaaagagat
attaatactgacttcctattggtagtactacgtgatgtcgttctagcttatcctgaagtc
cgcatcgttcttatgtctgcaactatcgatactaccatgttctgtgaatatttctttaat
tgccctatcattgaagtttatggaaggactttcccggttcaagaatattttctagaagat
tgcattcagatgacccaattcgttccccctccaaaggacaaaaagaagaaagataaggaa
gatgatggtggtgaagatgatgatgcaaattgcaatctaatatgtgctgatgaatatggt
ccagaaacaaaattgagcatgtctcagttgaatgaaaaggaaactccttttgaactcatt
gaagctctccttaagtacatcgaaaccctcaatgttccaggagctgtgttggtcttcttg
cctggctggaatttgatatatactatgcaaaagcatttggaaaataattcacattttgga
agtcaccggtatcaaattctacctctgcattctcagatccctcgggaggaacagcgtaaa
gtgtttgatccagttccagatggagtgaccaaagttattttgtccacaaatattgctgag
acaagcatcaccataaatgatgttgtttatgtcattgactcctgcaaacaaaaagtgaaa
ttgtttactgctcataacaacatgaccaactatgctactgtgtgggcatcaaaaacaaac
cttgaacagaggaaagggagagctggccgagtgcgacctgggttctgctttcacctgtgt
agtcgagctcgttttgacagactggaaacccacatgacaccagagatgttcagaacacct
ttgcatgaaattgctttgagcataaaacttctgcgtctaggtggaattggccagtttctt
gcaaaggcaattgaacctccacctttggatgctgtgattgaagcagagcatacgcttaga
gaacttgatgctttagatgccaatgatgagttgactcctttgggacgaatcctggctaaa
ctccccattgagcctcgttttggaaaaatgatgataatggggtgtattttctatgtggga
gatgctgtctgtaccatctcagctgctacttgctttccagagccctttatcagtgaagga
aaacgcctgggctatattcaccggaattttgctggaaacagattttctgatcatgtggct
cttttatcagtattccaagcctgggatgatgctaggatgagcggagaagaagcagaaata
cgtttttgcgagcaaaagagactcaatatggctacactaagaatgacttgggaggccaaa
gtacaacttaaagagattctgattaactctggctttccagaagattgtttgttgacacaa
gtgtttactaacactggaccagataataatttggatgtcgttatctctctgctggccttt
ggtgtgtaccccaacgtatgctatcataaagaaaagagaaagattcttaccactgaaggg
cgtaatgcccttatccacaaatcatctgtgaactgcccttttagcagccaagacatgaag
tacccatctcctttctttgtttttggtgaaaagattcgaacccgagccatctctgctaaa
ggaatgaccttagtcacccccttacagttacttctgtttgcctccaagaaagtccagtct
gatggacagatcatatttatagatgactggatcagactgcaaatatcacatgaagctgca
gcatgcatcacagccctccgggccgccatggaagctctggttgttgaagtgtccaaacaa
ccaaatatcatcagccaattggaccctgtaaatgaacatatgctgaatacgatccgtcag
atttctaggccttcagctgctggtatcaaccttatgattggaagtgtacggtatggcgat
ggtcctcgccctcccaagatggcccgatacgataatggaagtggatttagaagaggatat
ggtggaggaggatatgccgggggaggatatggtggtggctatggtggaggaggctttgga
ggcggctttggaagtggtgggggaggctttggaggtggcttcaacagtggcgggggtggc
ttcggtagtggtgggggaggctttggaagtggtggaggtggctttggtggtggcggagga
ggcttcggtggtgggggaggtaattttggtggtggcagaggcggcaactttgggggtagt
ggaggctttggaagcagtgggggaggctatggtggaggaggtgggggctatggaggtggt
ggtagtggtggtgggggctatggaggaggcagtggaggttatggaggtggtgggggaggt
tatggtggtggagaaggttacaatattagccccaactcctaccgtggaaattatggcgga
ggaggtggtggtggtggtggtggatatagaggaggttcccaagggggctacagaaacaac
ttcggtggagactacagaggatctagtggcgattaccgtggatctggtgggggctacaga
ggatctggaggattccagcgaaggggtggctatggaggtggttattttggacaaggaaga
ggaggagggggtggtggtggtggtggttattaa
DBGET
integrated database retrieval system
