Alexandromys fortis (reed vole): 126500910
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Entry
126500910 CDS
T08493
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04975
Fat digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
126500910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mfot02000
]
126500910
Transporters [BR:
mfot02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
126500910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
MMPL
ACR_tran
Folate_rec
Motif
Other DBs
NCBI-GeneID:
126500910
NCBI-ProteinID:
XP_049997171
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MAAGLKGWLLWALLLNSAQGDLYTPIHQAGYCTFYEECGKNPELSGGLTSLSNVSCLSNT
PARQVTGEHLALLQRICPRLYNGPNTTFACCSTKQLLALESSMSITKALLTRCPACSDNF
VSIHCQNTCSPNQSLFINVTRVVEQNASQLPAVVAYETFYQRSFAEAAYESCSRVRIPAA
ASLAVGSMCGVYGSALCNAQRWLNFQGDTGNGLAPLDITFHLVEPGQALAEGIQPLNAEI
APCNESQGADSAACSCQDCAASCPVIARPPALPPSFYMGKMPGWLALIIIFTAVFVLFTA
VLVHLRVASNRKKRKTPSPQEAPNHPRKRRFSPHTVLGRFFQNWGTKVASWPLTVLALSF
VVVIALSVGLMYIELTTDPVELWSAPKSEARKEKAFHDEHFGPFFRTNQVFVTARNRSSY
QYDSLLLGPKNFSGILSLDLLLELLELQERLRHLQVWSPEAGRNISLQDICYAPLNPHNT
TLSDCCVNSLLQYFQNNRSLLLLTANQTLGGQTSLVDWRDHFLYCANAPLTFKDGTSLAL
SCIADYGAPVFPFLAVGGYQGTDYSEAEALIITFSLNNFPADDPRMAQARLWEEAFLKEM
QAFQSSTADKFQVAFSAERSLEDEINRTTIQDLPVFAISYIIVFLYISLALGSYSRWKRI
AVDSKATLGLGGVAVVLGAVIAAMGFYSYLRVPSSLVIIQVVPFLVLAVGADNIFIFVLE
YQRLPRMPGEQREAHIGRALGSVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTAGLAI
LLDFLLQMTAFVALLSLDSKRQEASRPDVLCCLSPRKLPPPEQNEGLLLRFFRKIYAPFL
LHRFTRPVVMLLFLALFGANLYFMCHISVGLDQELALPKDSYLIDYFLFLNRYFEVGPPV
YFVTTSGYNFSSEAGMNAICSSAGCDSFSLTQKIQYATEFPEESYLAIPASSWVDDFIDW
LTPSTCCRLYSFGPNKDQFCPSTDTSFNCLRNCMGFTLGPVRPTPEQFDKYLPWFLNDPP
NIRCPKGGLAAYRTSVNMSSDGQVIASQFMAYHKPLRNSEDFTEALRTSRLLAANITAEL
RKVPGTDPDFEVFPYTVSNVFYEQYLTVLPEGIFTLALCFVPTFVVCYLLLGLDARSGIL
NLLSIIMILVDTIGLMAVWGISYNAVSLINLVTAVGMSVEFVSHITRSFAVSTKATRLER
AKDATVSMGSAVFAGVAMTNFPGILILGFAQAQLIQIFFFRLNIVITLLGLLHGLVFLPV
VLSYLGPDVNPDLVLEEKLATEAATAPEPSSPKHPSPDTDYVNPGFEDSTPGASAAGSSS
PKSGQKF
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggcctgaaaggatggctgctctgggccctactcctgaattcggcccagggg
gatctctacacacccattcatcaggctggctactgcaccttttatgaagagtgtgggaag
aatccagagctgtctggaggcctcacgtcactgtccaatgtatcttgcctgtctaatacc
ccagcccgccaggtcacaggggagcacctggccctcctccagcgcatctgtccccgcctg
tacaatggccccaataccacctttgcctgttgctccaccaagcagttgctggcattagag
agcagcatgtctatcaccaaggccctcctcacccgctgccccgcctgctctgacaatttt
gtgagcatacactgccaaaacacctgtagccctaaccagagcctctttatcaatgtcacc
cgtgtggttgagcagaacgcttcacagcttccggctgtggtggcctatgaaaccttttac
cagcgcagctttgctgaggcagcctatgagtcctgtagccgggtgcgcatccctgcagct
gcctcgctggccgtgggcagcatgtgtggggtctacggctccgccctttgcaatgcccag
cgctggctcaacttccagggagacacagggaatggcctggctccgctggacatcaccttc
caccttgtggagcctggtcaagccctggcagaggggatacagcctctgaatgcggaaatt
gcaccatgcaatgagtcccagggtgcagactcggcagcctgttcctgtcaggactgtgca
gcatcttgtcccgtcattgctcggcctccggcgctgcccccttccttctacatgggtaaa
atgccaggctggttggctctcatcattatcttcactgcggtctttgtgttgttcactgct
gtccttgtgcatcttcgagtggcttccaacaggaaaaagcgcaagacaccaagcccccag
gaagcccccaaccaccctcgtaagcgcagattctcacctcacactgtccttggccggttt
ttccagaactggggcacaaaagtggcctcgtggccactcaccgtcttggcactgtccttc
gtggttgtgatagccttgtcagtaggcctgatgtatatagaactcaccacagaccccgtg
gaactgtggtcagcccccaaaagtgaagcccggaaagagaaggctttccatgacgagcat
ttcggccccttcttccgaaccaaccaggtttttgtgacagctcgaaacaggtccagctac
cagtacgactcgctgctgctagggcccaagaactttagcgggatcctgtccctggacctg
ctgctggagctgctggagctccaagagaggcttcgccacctgcaggtgtggtccccggag
gcggggcgcaatatctccctgcaggacatctgctacgcccccctcaacccgcacaacacc
accctctcggactgctgtgtcaacagcctccttcagtacttccagaacaaccgctcgctc
ctgctgctcacagccaaccagacgcttggtggtcagacttccctggtggactggagggac
cacttcctctactgtgccaatgcccctctcacattcaaggacggcacgtctctggccctg
agctgcatagctgactacggggctcctgtcttccccttccttgctgttggggggtatcaa
gggacggactactcggaggcagaggcgctgatcataaccttctctctcaataacttccct
gctgatgatccccgcatggcccaggccaggctctgggaagaggcttttctgaaggaaatg
caagccttccagagcagcacggctgacaagttccaggttgcattctcagcagagcgctcc
ctggaggatgaaatcaaccgcaccaccatccaggacctgcctgtcttcgccatcagttac
attatcgtcttcctgtacatctccctggccctgggcagctactccagatggaaacgaata
gcggtggattccaaggctactctgggcctaggcggggtggctgttgtgctgggagcagtc
atagctgccatgggcttctactcctacctgcgtgtcccctcttctctggttatcatccaa
gtggtacctttcctggtactggccgtgggagctgacaacatcttcatctttgttcttgag
taccagaggctgcctaggatgcctggggaacagcgagaggcccacattggccgtgccctg
ggcagtgtggcccccagcatgctgctgtgcagcctctccgaggccatctgcttcttccta
ggggccttgacccccatgccggctgtgcggacctttgccttgactgctggcctggcgatt
ctcctcgacttcctgctccagatgactgcctttgtggccctgctctccctggatagcaag
aggcaggaggcctctcgcccagacgtcttatgttgcctttcaccccggaaactacctcca
cctgagcaaaacgagggactcctactccgcttcttccgaaagatatatgctcccttcctg
ctgcacaggttcacccgccctgttgtgatgcttctgtttctggccctgtttggagcgaat
ctctacttcatgtgtcacatcagcgtgggactggaccaggagctggctctgcccaaggac
tcctacctgatcgactacttcctctttttgaaccgatactttgaagtggggcctccagtg
tactttgtcaccacctcgggctacaacttctccagcgaggcaggcatgaatgccatttgc
tctagtgcaggctgtgacagcttctccctaacccagaagatccagtatgccactgaattc
cctgaagagtcttatctggcgatccctgcatcctcctgggtagacgacttcatcgactgg
ttgactccatccacctgctgccgcctttactcctttggtcctaataaggatcagttctgt
ccttcaaccgatacttccttcaactgtttaagaaactgcatgggcttcacgctgggcccc
gtgaggcccacaccagaacagtttgacaagtacctgccctggttcctgaacgacccaccc
aacatcagatgtcccaaagggggtctagcagcgtatagaacctccgtgaatatgagctca
gatggccaggttatagcctcccagttcatggcctaccacaagcccctcaggaactcagag
gatttcacagaagctctccggacgtcccggctgctagcagccaatatcacagctgaactg
cggaaagtgcctggcacagacccagacttcgaggtcttcccctacacggtctccaatgtg
ttctacgagcagtacctgactgtcctccctgaggggattttcacactggctctctgcttt
gtacccacctttgttgtctgctacctcctgctgggtctggatgcgcggtcaggcatcctc
aacctgctctccatcatcatgatccttgtggacaccatcggtctcatggctgtgtggggt
atcagctacaacgctgtgtccctcatcaaccttgtcacggcagtgggcatgtctgtggag
tttgtgtcccacatcacccggtcctttgctgtcagcaccaaggctacccggctggagagg
gccaaggatgctaccgtctccatgggcagtgcggtgtttgctggagtggccatgactaac
ttcccaggcatcctcatcttgggctttgctcaggcccagcttatccagatcttcttcttc
cgcctcaacatcgtgatcaccttgctgggcctgctgcatggcctggtcttcctgccagtt
gtcctcagctatctgggacctgatgttaacccggatctggtactggaggaaaaactagcc
acagaggcagcaacggccccagagccttctagtcccaagcaccccagccccgacacagac
tatgttaaccctggctttgaagactctacccctggagctagtgctgctggcagctcttcg
cccaaaagtggccagaagttttaa
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