Alexandromys fortis (reed vole): 126502037 Help Entry 126502037         CDS       T08493                                  Name (RefSeq) protocadherin-15   KO K16500   protocadherin-15 Organism mfot  Alexandromys fortis (reed vole) Brite KEGG Orthology (KO) [BR:mfot00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:mfot03037]     126502037    04515 Cell adhesion molecules [BR:mfot04515]     126502037 Cilium and associated proteins [BR:mfot03037]  Primary cilia and associated proteins   USH complex and associated proteins    126502037 Cell adhesion molecules [BR:mfot04515]  Cadherins   Protocadherins    126502037 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Cadherin_CELSR2_9th PRIMA1 Motif Other DBs NCBI-GeneID:  126502037 NCBI-ProteinID:  XP_049998756 LinkDB All DBs Position Unknown AA seq 1766 aa AA seqDB search MFPQWALWKCVPHGIIIASLLAVSWGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM LIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC VNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID DGPNGQIEYVIQYNPEDPMSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQN LNERRTTTTTLTVDILDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPILV TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELTLLEAVNRDFHQK FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISESVNL TTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTPTGITRYLTLLQPVDREEQQTYTFL ITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGS NGEISYEILVGAQGDFVINRTTGLVSVAPGVELIVGRTYALTVQASDNAPPAERRHSICT VYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENGDPQRV FNLSETTGILTLGKALDRESTDRYILIVTASDGRPGGTSTATVNVVVTDVNDNAPVFDPY LPRNLSVLEEEANAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE VRDHYELVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQ IEAKDVDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA TVRILVLHPGEIPRFTQEEYRPPPVSELATKGTVVGVISAAAINQSIVYSIVAGNEEDKF GINNVTGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDH PPVFQKKFYIGGVSEDARMFASVLKVKATDRDTGNYSAMAYRLIIPPIKEGKEGFVVETY TGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYSKCDLTVYAIDPQTNRA IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL AFIIILCCIPAILVVLVSYRQRQAECTKTARIQSAMPAAKPAAPVPVAPPPPPPPGPHLY EELGDSTMYEMPQYGSRRRLLPPAGQEEYGEVMGEAEEEYEEEEEEPEKVKKPRVEIREP SEEEVVVTVEKPPAAEPTYPTWKKARIFPMIFKKVRGLAEKRGIDLEGEEWKRRLEEEDK DYLQLTLDQEEATESTVESEEESSDYTEYTETESEFSESETTEESESETPSEEEEESSTP ESEESESTESEGEKARKNIVLARRRPVVEEVQELKRKREEPPEEQEEEPPVEEEQAVEEE SEAAPADESADLEAQDILEEGSAESASVERGVESEEEAELSSSSSSTSESLSGGPWGFQV PDYDRREDADPKKSPGANSEGYNTAL NT seq 5301 nt NT seq  +upstreamnt  +downstreamnt atgttcccacagtgggctctatggaagtgtgtaccccatgggatcattattgcctcgctc ttggcagtcagctggggccagtatgacgacgattgcaaactagctaggggaggcccacca gctaccatcgtggccattgatgaagagagccggaatggtacaattctggtggacaacatg ctgattaaggggactgctggaggaccagaccccaccatagagctctctttaaaggacaac gtggactactgggtgttgttggaccctgttaaacagatgcttttcctgaacagtaccgga agagttctggacagagacccaccaatgaacatacactccatcgtggtgcaagtccagtgt gtcaacaagaaggttggcacagttatctatcacgaagtacgcattgtggtgcgggacagg aatgacaactcacccacattcaagcacgaaagctactatgccacagtgaatgagctcact ccagttggcaccacaatattcacggggttttcaggagacaatggagctacagacatcgat gatggcccgaatggacagatagagtatgtcattcagtacaacccagaagatccgatgtcc aacgacacctttgaaatcccactcatgctaaccggaaatgtggtgctgaggaaacgactc aactatgaggacaagactcgctactacgtcatcatccaagctaacgaccgtgcccagaat ctgaatgagaggcgaacaaccaccactaccctcacggtggacattctagatggagatgac ctcggaccaatgtttctgccctgtgtccttgtgccaaacacccgtgactgccgtccacta acctaccaagctgccattcctgaactgaggactccggaagaactgaaccccattttggtg accccacctatccaagccattgatcaggaccgaaacatccagccaccatcagatcgacct ggcatcctctactccatccttgttggcacccctgaggactacccccgcttcttccacatg catcccaggactgccgagctcactcttctggaggcagtcaacagagacttccaccagaaa ttcgatttggttattaaggctgagcaggacaatggccacccacttcccgcctttgctagt ctacacatcgaaatactggatgaaaacaatcagagcccatatttcacaatgcccagctat caagggtacatcctggaatctgcaccagtgggcgccaccatttctgagagcgtaaaccta accactcctctgagaattgtagctctggacaaagacatagaagacacaaaagatccagaa ctccatcttttcctgaacgattatacctcagtcttcactgttacccccaccggcatcacc cgctacctgaccctccttcagcctgtggacagggaggaacagcaaacatatacctttctg ataacagcatttgatggtgtacaagaaagtgaaccagttgtggtcaatatccgagtgatg gacgcaaatgataacacaccaaccttcccagagatctcctatgacgtctatgtttacaca gacatgcgtcctggggacagtgtcattcagctgacggcagtagacgctgatgaaggctct aatggggagatctcttatgaaatcctggtgggcgcccagggagacttcgtcatcaacagg accacggggctggtgagcgttgcaccaggagtggagctgatcgtgggccggacttacgca ctgacagtgcaggcctcggacaacgccccgcctgcagagagaaggcactccatctgcacg gtgtacatcgaggtgctgcctcccaacaaccagagccctccccgcttcccgcagctgatg tacagcctagaagtcagcgaagccatgaggatcggcgctgttttattaaatctacaggca actgatcgagagggagacccaatcacatatgccatcgagaatggagaccctcagcgagtt tttaatctctcagaaaccacggggattctcacgctagggaaggcgctagacagggagagc acagaccgctacatcctcatcgtcacagcctcagatggcaggcccggtgggacctccact gccactgtgaatgtggtggtgacagatgtcaatgacaacgctcccgtgtttgatccctat ctgccccggaatctctccgtgctggaggaggaggccaatgccttcgtgggacaagtgagg gcaacagatccagatgctgggataaatggccaagtgcactacagcctgggtaacttcaac aacctcttccgcatcacgtccaatgggagcatttacacagccgtgaagctgaacagggaa gtcagggaccactatgaactggttgttgtggcaacggatggagccgtgcaccctcggcat tcaacgctgacactgtacatcaaggtgttggacattgatgataacagtcctgtttttacc aattcaacatacacagtcgtggttgaagagaatctgccagctgggaccaccttcctgcaa atagaggccaaggatgtggatcttggagcaaatgtgtcgtatcggatcagaagccctgag gtgaagcacctttttgcacttcatccatttactggagaattgtcccttttgaggagtttg gattatgaggcctttcctgaccaggaagccagcatcacattcttggtggaggcctttgat atttatggaacaatgccacctggtatagcgacagtcacggtaattgtcaaggacatgaat gactaccctccggtatttagtaaacgtatctacaaggggatggtggctccagatgctgtc aaagggacaccaatcacgaccgtgtatgctgaagatgcagaccctcctggtttgcctgca agtcgggtgaggtatcgagtggatgatgtgcagtttccgtaccctgccagcatttttgat gtagaagaagattctggaagagttataactcgtgtcaatcttaatgaagagcctacaacc atttttaagctggtggttgtggcttttgatgatggcgagcctgtgatgtccagcagtgcc accgtgagaattctcgtcttacatcctggagagatcccccgcttcacccaggaggagtat aggcctcctcctgtaagtgagcttgccaccaaagggactgtagttggtgtcatttctgcc gccgctatcaatcagagcatcgtgtactccattgtggcaggaaacgaggaagataagttc gggatcaacaacgtcacaggggttatctatgtgaatgcacccctggattacgaaacacgg accagctatgtgcttcgggtgcaagcagactctctggaagtggtcctcgccaatctccgg gttccttcaaaaagcaacacagctaaagtgtacatcgagattcaggatgaaaacgatcac cccccagtgtttcagaagaaattctacattggtggtgtgtctgaggatgcaaggatgttt gcctctgtgctcaaagtgaaggctactgacagggacaccggaaactacagtgccatggcc tacaggctcatcataccgcccattaaagagggcaaagagggatttgtggtggaaacatac actgggctcatcaagacagccatgctcttccacaatatgaggagatcctacttcaagttt caagtcatcgcaactgacgactacgggaaggggttgagcgggaaagctgacgtgctggta tcagtggtcaatcaactggatatgcaggtcattgtctccaatgtaccacctacattagtg gaaaagaagatagaagacctcacagagattttggatcgctatgttcaggagcaaattcct ggtgccaaggttgtggtagagtccattggtgcccgtcgccatggagacgccttctcctta gaagactatagcaagtgcgatctgactgtctatgccatcgacccccagaccaacagagcc atcgacagaaatgagctttttaaattcctagatggcaaactgctcgatatcaataaagac tttcaaccgtattacggggaaggaggacgcattctggagatccggactcctgaggcagtg acgagcatcaagaagcgaggggaaagcttagggtacacggaaggggccttgctggctttg gccttcatcatcatcctctgctgcatcccggccatcttggttgtcttagtgagctacaga caacgccaggctgagtgcaccaagacggcaagaatccagtctgccatgcctgcagccaag cctgcagctcccgtgcctgtggcaccgccaccaccaccacctccagggccacatctctat gaggagctgggagacagcaccatgtatgaaatgccccagtacggaagtcgccgccgactg cttccgcctgctggccaagaggagtacggagaagtgatgggcgaagctgaagaggaatac gaagaggaagaggaagagccagagaaagttaaaaaacccagagttgaaattagagaacct agtgaggaagaggtagtggtcaccgttgagaagccaccagccgctgagcccacgtaccca acgtggaagaaagccaggatattcccgatgatttttaagaaagtccgaggtctcgctgag aaaagaggcattgaccttgagggtgaggagtggaaaaggcgccttgaggaagaagacaaa gactatctccaactaactctagaccaggaggaagctacagaaagcaccgtggaatccgag gaggagtcgagcgactacacagaatacacagaaacggagtccgagttcagtgagtctgag accacagaagagtctgagtcggagaccccgtctgaggaagaggaggagagctcgacccct gagtcagaggaatccgagtccactgagtccgaaggagagaaagcaaggaaaaacatcgtg ctagctagaagaaggcctgtggtagaggaagtccaggaactgaaacgcaagagagaggag ccaccggaagagcaggaggaagagcctccggtagaagaagaacaggcagtagaagaagaa agcgaagccgctcccgcggatgagtccgcagacctggaggctcaagacatccttgaggag ggcagtgcagaatcagcctcggtggagagaggcgtggaaagtgaggaggaggcagagctc agcagcagcagcagcagcactagtgaaagtctctctggaggcccgtggggcttccaggtg ccagattacgacagaagggaggatgcagaccccaagaaatctcccggggcaaactcggaa ggctacaacacagccctttag

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